Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cone11ag1306 ATGAGAGATAAATTATTGCATGTGTTTATTAGTTTCGGTCCAAGAAGAAAACCAAAGCTATCATTTCAGAGGTTCACCATGGGTTATAATAATTCAAGATCCGTAAGATTCCGAGATGACGATGATGATGATGATGAATCATTAAAGCGCCCTACTAAGCTCAAGGTCAATATAGACGGGACGAATATAGCGGACTCAAGCAATGGGAAAGATGAGAATCCTGTTTCATGGAAAGCCGGGAAATCCTTGAAAGCCAAAGTATTGTCTAGAGTCTTTTCTGAGGACTATGAGAGAGTGCAGAGGAAGATCCTGGACCCTAGAGGGGAAAAGATAAGGAGATGGAACAAGATCTTTCTAGTAGTTTCTTTAGTTTCTTTGTTTGTAGACCCTCTATTCTTTTACTTGCCAGTTGTCTCTGATGAGATGTGCATTCGAATCGGGTTCCATCTTGAGGTTATTCTTACAACTATAAGATCCATGGCCGATGTTTTCTACTTGGTCCAAATCTTTATTAGATTCCGAACTGCTTATGTCGCACCTTCTTCCCGTGTTTTTGGAAGAGGAGAGATTGTCATAGACTCTTCCAAGATTGCCTTAAGGTATCTTTGCCAGGGTTTTTGGATTGACCTCTTTGCTGCTCTTCCCCTCCCTCAGGTTGTGATTTGGATTGTCATTCCGAGCCTAGGTGGTTCTACGATGACAAACACTAAGAACTTCCTCCGGTTCATACTTATATTTCAGTATTTTCCAAGACTCTTCCTCATATTCCCTCTCTCTGCACAAATCGTTAAGGCATCTGGTGTTGTCACACAGACGGCTTGGGCCGGTGCTGCTTATAATCTCATGCTTTACATGTTGGCAAGTCATGTTTTAGGAGCTTGTTGGTACCTTCTATCGATCGAACGGGAGGAAGATTGCTGGAGGACAGTATGTAAGCTCAATCCACAATCTTGTAATAATAATTTCTTCGATTGCAATGAAGTGGGCAATCCTAGTAGGAGCTCTTGGTTTATATCGAGCAATGTTACAAACTTATGCAACCCAGATGATAGCTTCTACTCCTTTGGGATATACGGTGATGCAGTGACAGATCATGTCACGACATCTACATTCTTCAACAAGTACTTCTACTGTCTCTGGTGGGGCCTCAAGAATCTAAGTTCCTTAGGACAGAATCTTGCCACAAGCACTTATGTTGGAGAAATTACATTCGCCATAATTGTTGCGACTCTCGGGCTTGTTCTCTTTGCATTGCTCATTGGTAACATGCAAACATACCTCCAATCAACAACGGTCCGATTAGAAGAATGGAGGATAAAGAGAACAGATACGGAACAATGGATGCATCACTGTCAACTACCTCCAGAACTCAAACAATCCGTACGGAAGTACGATCAGTACAAGTGGGTAGCAACTCGAGGAGTTGATGAAGAAGCTCTTCTAAAAGGCCTTCCTATGGATCTCAGAAGAGACATTAAACGCCACCTTTGTCTAGACCTAGTCCGAGGAGTCCCCTTGTTTGATCAAATGGACGAGAGAATGCTCGATGCAATATGTGAACGGCTTAAACCGGCTCTATGCACGGAAGGCACGTTTCTCGTACGAGAAGGGGACCCAGTCAATGAAATGCTGTTTATTATCCGAGGCCACCTTGACTCTTACACTACTAATGGGGGACGGACTGGGTTCTTCAACTCATGTCGGATCGGACCCGGTGACTTTTGTGGCGAGGAGCTTCTGACGTGGGCCCTGGACCCACGTATGAGTATCATCCTACCCTCCTCCACCCGTACGGTCAAAGCCATTTCAGAAGTTGAGGCATTTGCTCTCATTGCGGAGGACTTGAAATTCGTAGCTTCACAATTTAGACGACTTCATAGTAAACAACTCCGGCACAAGTTCCGGTTTTACTCACACCAGTGGAGAACGTGGGCTGCATGTTTCGTACAGGCGGCCTGGCGTAGGTATAAGAGACGGAAGCAAGCGTCCGAGCTCAGGGCTAGAGAGAAGTCTGTTGTTTCTAATGAGGCAGATTCAGCCCCACCACCCTTTTCGTATGTCTCGAGATTGGCAGCTAGTACTAGGTTGGTGGGAAGTACGAGGAGGGTCGTTACTATGACACGTTCGGGTTCGGATCCTGAGGTTAGCTCGTTGCAGAAGCCGGAAGAACCAGACTTTTCGGTTGTTGAATGA 2193 44.92 MRDKLLHVFISFGPRRKPKLSFQRFTMGYNNSRSVRFRDDDDDDDESLKRPTKLKVNIDGTNIADSSNGKDENPVSWKAGKSLKAKVLSRVFSEDYERVQRKILDPRGEKIRRWNKIFLVVSLVSLFVDPLFFYLPVVSDEMCIRIGFHLEVILTTIRSMADVFYLVQIFIRFRTAYVAPSSRVFGRGEIVIDSSKIALRYLCQGFWIDLFAALPLPQVVIWIVIPSLGGSTMTNTKNFLRFILIFQYFPRLFLIFPLSAQIVKASGVVTQTAWAGAAYNLMLYMLASHVLGACWYLLSIEREEDCWRTVCKLNPQSCNNNFFDCNEVGNPSRSSWFISSNVTNLCNPDDSFYSFGIYGDAVTDHVTTSTFFNKYFYCLWWGLKNLSSLGQNLATSTYVGEITFAIIVATLGLVLFALLIGNMQTYLQSTTVRLEEWRIKRTDTEQWMHHCQLPPELKQSVRKYDQYKWVATRGVDEEALLKGLPMDLRRDIKRHLCLDLVRGVPLFDQMDERMLDAICERLKPALCTEGTFLVREGDPVNEMLFIIRGHLDSYTTNGGRTGFFNSCRIGPGDFCGEELLTWALDPRMSIILPSSTRTVKAISEVEAFALIAEDLKFVASQFRRLHSKQLRHKFRFYSHQWRTWAACFVQAAWRRYKRRKQASELRAREKSVVSNEADSAPPPFSYVSRLAASTRLVGSTRRVVTMTRSGSDPEVSSLQKPEEPDFSVVE 730
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 9650037 9653343 - Conep11aG0135000.1 Cone11ag1306 448558
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cone11ag1306 730 Gene3D - 117 430 - -
Cone11ag1306 730 SMART cnmp_10 506 637 IPR000595 -
Cone11ag1306 730 PANTHER CYCLIC NUCLEOTIDE-GATED ION CHANNEL 15-RELATED-RELATED 84 693 - -
Cone11ag1306 730 SUPERFAMILY Voltage-gated potassium channels 106 428 - -
Cone11ag1306 730 MobiDBLite consensus disorder prediction 703 730 - -
Cone11ag1306 730 ProSiteProfiles cAMP/cGMP binding motif profile. 506 603 IPR000595 -
Cone11ag1306 730 PRINTS EAG/ELK/ERG potassium channel family signature 469 476 IPR003938 GO:0005249(InterPro)|GO:0006813(InterPro)|GO:0016020(InterPro)
Cone11ag1306 730 PRINTS EAG/ELK/ERG potassium channel family signature 401 412 IPR003938 GO:0005249(InterPro)|GO:0006813(InterPro)|GO:0016020(InterPro)
Cone11ag1306 730 PRINTS EAG/ELK/ERG potassium channel family signature 419 428 IPR003938 GO:0005249(InterPro)|GO:0006813(InterPro)|GO:0016020(InterPro)
Cone11ag1306 730 PRINTS EAG/ELK/ERG potassium channel family signature 286 296 IPR003938 GO:0005249(InterPro)|GO:0006813(InterPro)|GO:0016020(InterPro)
Cone11ag1306 730 PRINTS EAG/ELK/ERG potassium channel family signature 375 392 IPR003938 GO:0005249(InterPro)|GO:0006813(InterPro)|GO:0016020(InterPro)
Cone11ag1306 730 PRINTS EAG/ELK/ERG potassium channel family signature 169 178 IPR003938 GO:0005249(InterPro)|GO:0006813(InterPro)|GO:0016020(InterPro)
Cone11ag1306 730 Pfam Ion transport protein 114 433 IPR005821 GO:0005216(InterPro)|GO:0006811(InterPro)|GO:0016020(InterPro)|GO:0055085(InterPro)
Cone11ag1306 730 FunFam Cyclic nucleotide-gated ion channel 1 504 622 - -
Cone11ag1306 730 FunFam Cyclic nucleotide-gated ion channel 1 433 497 - -
Cone11ag1306 730 SUPERFAMILY cAMP-binding domain-like 436 632 IPR018490 -
Cone11ag1306 730 ProSiteProfiles IQ motif profile. 642 671 - -
Cone11ag1306 730 Gene3D Helix hairpin bin 433 497 - -
Cone11ag1306 730 Gene3D Jelly Rolls 504 624 IPR014710 -
Cone11ag1306 730 Pfam Cyclic nucleotide-binding domain 529 615 IPR000595 -
Cone11ag1306 730 CDD CAP_ED 506 637 IPR000595 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cone11ag1306 Cone-Chr11:9650037 Cone2ag0610 Cone-Chr2:3700486 1.18E-267 dispersed
Cone11ag1306 Cone-Chr11:9650037 Cone18ag0273 Cone-Chr18:1321386 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cone11ag1306 K05391 - csv:101210775 1082.4