Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Cone11ag1309 | ATGGCAGCCTACTGTTCTGAACTCCAGTTTCTGGCTAACCCTGTTACCAATTATGTCCAAAGTGCTGAGAAACACAATCAAGATGTGAATTCTTTGGGTTTGATCTCTTTGGGGAAAACAGCAGAAGTCGTAGACATCTTGAAGCTCACGAGTTCTACTTTTTTGGTGGCACTTTGTCAAGCTATAGATTTGAGGCATATAGAGGATAACCTGAAGAATGCTGTGAAGAAGAGTGTGAGCCAAGTGGCTAAGAAGGTACTAACAATGGGAGTCGACGGAGAGCTTCATCCTTCAAGATTTTGTGAGAAAGATTTGCTCAAAGTTGTGGATTGTGTGAATGTTTTTGGGTACATCGATGATCCATGCAATGCCTTCTTACCCACTAATGCAAAAGCTGTGGCAAGTGCCTCAAAGTTGTGGCAAGTGCTTGTTGAACATGCATTGATAAACAATGAAGATTTGAGGAATCCTAGTGGGTCAATCTTTTTGAAGATTGGAGCTTTTGAGGAGGAATTGAAGACCCTTTTGCCTAAAGGGTTTGAAAGTAAGGGTATAGAAATTGGTAATAAAGTTAAGGAGTATAGGTCTTATCCATTTTATAGATTTGTGAGGGAAAAACTAGGGGCTGAATTTCTGACTGGAGAGAAACTGAAGTCCCCAGGAGAGGAGTTTGACAAGGTCTTCTCAGCTATTTGTGAGGGTAAAATTATCGACTTAATGCTTGAAATATGTTAG | 735 | 40.41 | MAAYCSELQFLANPVTNYVQSAEKHNQDVNSLGLISLGKTAEVVDILKLTSSTFLVALCQAIDLRHIEDNLKNAVKKSVSQVAKKVLTMGVDGELHPSRFCEKDLLKVVDCVNVFGYIDDPCNAFLPTNAKAVASASKLWQVLVEHALINNEDLRNPSGSIFLKIGAFEEELKTLLPKGFESKGIEIGNKVKEYRSYPFYRFVREKLGAEFLTGEKLKSPGEEFDKVFSAICEGKIIDLMLEIC | 244 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 11 | 9665820 | 9666554 | + | Conep11aG0135300.1 | Cone11ag1309 | 448561 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Cone11ag1309 | 244 | Gene3D | - | 68 | 184 | IPR023144 | - | |
| Cone11ag1309 | 244 | Gene3D | Fumarase/aspartase (Central domain) | 185 | 244 | - | - | |
| Cone11ag1309 | 244 | Pfam | Aromatic amino acid lyase | 1 | 81 | IPR001106 | - | |
| Cone11ag1309 | 244 | PANTHER | HISTIDINE AMMONIA-LYASE | 1 | 243 | IPR001106 | GO:0016841(PANTHER) | |
| Cone11ag1309 | 244 | SUPERFAMILY | L-aspartase-like | 1 | 243 | IPR008948 | GO:0003824(InterPro) |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Cone11ag1309 | Cone-Chr11:9665820 | Cone1ag1357 | Cone-Chr1:56574402 | 1.83E-103 | dispersed | |
| Cone11ag1309 | Cone-Chr11:9665820 | Cone18ag0271 | Cone-Chr18:1311305 | 1.98E-129 | transposed |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Cone11ag1309 | K10775 | - | cit:102619342 | 340.117 |