Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cone11ag1319 ATGGAGAAATCCGGTTACGGTCGAGACGGCATATTCAGGTCACTTCGACCCCATATCCGATTCCCTACCGACCCTAACGTCTCTATGATCTCTTTCCTCTTCAGAAACTTACCATCTTATCCCAACAAACCCGCCTTAATCGACGCTGAATCTTCTGAAACGATCTCCTTCTCCCAACTCAAATCCTTAGTAATCAGAGCCTCCCATGGCTTCCTCCACCGCCTCGGCCTCACCAAGAACGACGTCGTTCTCATCTTCGCTCCCAACTCCATCCATTACCCCGTCTGCTTCTTCTCAATCATCGCCGTCGGAGCCATCGCCACCACCTGCAACCCTGCCTACACTGTCGCCGAGCTCACCAAACAAATCAAGGACTCCAAGCCCAAGATTATCGTCACTATTCCTCAATTATGGGATAAAGTCAAGGATTTGAATCTCCCTACAGTCTTTCTTGGAAACATAGATTCCTCATCTTCAATCTCCTCGGAATCGACGGTCGTAAATTTCCACGATTTGCTCAATTTATCTGTTCCGGCGGTTTCAGATTTCCCGACGGTTGATATAAAGCAAACAGATACAGCGGCGCTTTTGTATTCGTCGGGAACAACTGGGACTTCTAAGGGTGTGGTTTTAACGCATATGAACTTCATAACGGCATCGTTAATGGTCAGTGTGGATCAAGAGACATCAGGTGAGAAACACAAAGTGTTCCTTAACGTCTTGCCCATGTTTCATGTGTTCGGTTTGGCTTGTATCTCTTACGCGCAGCTTCGGATGGGGAATGCGATTGTGGTTATGGCTAAGTTTGAGTTTGAGAAAATGTTGTCGGCTATAGAGAGGTATAAGGTGACGGATTTGTGGATTGTGCCGCCTATTGTTCTTGCTCTGGCAAAACAGAGTGTGGTGAAGAAATATGATCTTTCTTCTTTGAAGGCTATCGGTTCTGGGGCTGCTCCTTTGGGTAAGGATTTGATGGAGGAATGTTGTAGGAATATTCCTAGTGCTGTGGTTAAGCAGGGCTATGGTATGACTGAAACTTGTGGGGTAGTGGCCATAGAAAACACACTTGTTGGAATCCGGAATTCGGGGTCGGCAGGGACACTAGCTTCAGGGGTTGAAGCTCAAATAGTAAGTGTTGATACATTGAAGCCACTTCCTCCTAACAAACTTGGCGAGATTTGGGTCCGTGGACCTTGTATGATGAAAGGTTATTTGAACAATCCACAGGCCACTCGGGAGACCATCGATAGAAACGGATGGGTCCATACAGGAGATCTCGGATATTTCGATGAAAATGGGCATCTATTAGTTGTTGATCGAATTAAGGAGCTGATCAAGTATAAAGGTTTTCAGGTGGCACCAGCTGAACTTGAAAGTCTGCTCGTATCTCACCCTGAAATTTTAGATGCTGTTGTCATCCCATTTCCGGATGCTGAAGCGGGTGAGGTCCCAATCGCGTATGTTGTTCGTTCTCCAAACGCTTCTCTAACCGAAAACGATGTTATGAAATTTATCGCTAATCAGGTTGCTCCATTCAAACGGTTACGGAAAGTGACGTTTGTTAACAGCGTCCCGAAATCGGTATCAGGGAAAATTCTTAGAAGAGAGCTGATCCAGAAAGTTAGATCCAAAATCTGA 1638 45.91 MEKSGYGRDGIFRSLRPHIRFPTDPNVSMISFLFRNLPSYPNKPALIDAESSETISFSQLKSLVIRASHGFLHRLGLTKNDVVLIFAPNSIHYPVCFFSIIAVGAIATTCNPAYTVAELTKQIKDSKPKIIVTIPQLWDKVKDLNLPTVFLGNIDSSSSISSESTVVNFHDLLNLSVPAVSDFPTVDIKQTDTAALLYSSGTTGTSKGVVLTHMNFITASLMVSVDQETSGEKHKVFLNVLPMFHVFGLACISYAQLRMGNAIVVMAKFEFEKMLSAIERYKVTDLWIVPPIVLALAKQSVVKKYDLSSLKAIGSGAAPLGKDLMEECCRNIPSAVVKQGYGMTETCGVVAIENTLVGIRNSGSAGTLASGVEAQIVSVDTLKPLPPNKLGEIWVRGPCMMKGYLNNPQATRETIDRNGWVHTGDLGYFDENGHLLVVDRIKELIKYKGFQVAPAELESLLVSHPEILDAVVIPFPDAEAGEVPIAYVVRSPNASLTENDVMKFIANQVAPFKRLRKVTFVNSVPKSVSGKILRRELIQKVRSKI 545
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 9727013 9729776 - Conep11aG0136400.1 Cone11ag1319 448571
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cone11ag1319 545 FunFam Long-chain-fatty-acid--CoA ligase FadD 13 442 - -
Cone11ag1319 545 Gene3D - 443 544 IPR045851 -
Cone11ag1319 545 SUPERFAMILY Acetyl-CoA synthetase-like 22 542 - -
Cone11ag1319 545 FunFam 4-coumarate--CoA ligase 2 443 544 - -
Cone11ag1319 545 Pfam AMP-binding enzyme 35 405 IPR000873 -
Cone11ag1319 545 Gene3D - 9 442 IPR042099 -
Cone11ag1319 545 CDD 4CL 21 537 - -
Cone11ag1319 545 ProSitePatterns Putative AMP-binding domain signature. 196 207 IPR020845 -
Cone11ag1319 545 PANTHER LONG-CHAIN-FATTY-ACID--COA LIGASE 9 537 - GO:0016405(PANTHER)
Cone11ag1319 545 Pfam AMP-binding enzyme C-terminal domain 456 531 IPR025110 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cone11ag1319 Cone-Chr11:9727013 Cone3ag0722 Cone-Chr3:3690259 7.96E-235 dispersed
Cone11ag1319 Cone-Chr11:9727013 Cone13ag1252 Cone-Chr13:9513602 1.99E-41 wgd
Cone11ag1319 Cone-Chr11:9727013 Cone18ag0258 Cone-Chr18:1244953 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cone11ag1319 K01904 - csv:101220141 799.275