Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cone11ag1324 ATGGTTGGGGCCGGTGCGACTTACCTATTCGGAAGTTATTCAAAAATGTTAAAGACCACGTTCGATTACAACCAAAAGAAGATAAACACAATGGGGTTCGCTAAAGACCTCGGTTCGAACATGGGCATCATATCCGGTCTACTATCCGAGTTTGTCCCGGATTGGGGCCTCCTCGTACTCGGAGGCACCACCAACTTCTTTAGTTACTTCTTAATGTGGTTAGCCGTCACGCACCGGTCCGCCCAGCCAAAATTCTGGGAAATGTGTACTTACATTGGCATAGCAACTAATTCCCAAAACTTTGTAAACACAGCCGTGCTTGTTTCTTGCGTAAGAAACTTTCCGGAGAGACGAGGTATCGTATTGGGCCTGTTAAAGGGCTTCGTAGGCCTAAGTGGCGCCATCATGACCCAGCTCTACTACGCCTTTTATGGACCGGACCAGCCCGGTACGCTAGTCCTATTCCTGGGCTGGTTCCCTTCGGTTCTGTGCCTGATCTTCGTCTGCACGATCCGTACAGTTAAACCCCATTACTCAGAAAACCCAAACGAGCTCAGAGCCTTTTACCAGTTCCTCTACATGTCCATTCTCCTCGCTGTCATCCTCATGGTCTTGGGCCTGACCCAGAAAACGACAGAGTTTTCTCAGAACGCTTATGTCGGAGGTGCCGCTGTGATCATCGTTCTGCTTATTCTACCTCTAGTTATCGCCATTAGAGAAGAGCTCGAGATCTGGAACAACAAAAAATGTATCTCCCCTGCCACCTCAGTAAAATCCATCGATAACGAACCCAGAAATGAAGTACCAGAAGAGCCCCTGTTTATCTATTCCAACATATGGGATAAGCCAGAAAGAGGAGAAGACTACACAATCTTACAGGCTTTATTCAGTAAGGACATGCTTCTTCTAATCATATCAATCGTGCTCGGAAGTGGGTCCACACTCGCCGCCATTGATAACTTGGGCCAAGTGTGCGAGTCGTTAAAATACCCGACCCATTCCGTAGGCTTCATCTTATCTCTAGTAAGCATTTGGAATTTCTTCGGTCGGATTTTATCCGGGTTCCTGTCGGAATTTCTACTCGACAAATATCAATTTCCTCGACCTTTGGTTTTGTCGATTGTCTTTCTAATCTCCTGCATGGGCCATTTGATAATCGCTTTCCCATTCAGCCACTCTGTCTACGTGGCCTCATTGTTAATTGGGCTTACGTTTGGGGCCGAAGTGACGTGTCTGTTCTCGATCGTGTCGGAGTTATTTGGGCTGAGGCATTTTGCGCTCCTGTTCAATTGCATGCAGATGTTTGTTCCGATTGGGTCTTACTTGTTGAACGTGGAGGTGATTGGGATTTTGTACGATAAGGAAGCGGTGAAGGGTGGAGCCCACCTGGTAACGGGGAGAGGGCTAACGTGTATCGGGGCCCACTGTTTCGCGCAATCGTTTGCGATATTGGCGACGGTTACGTTTCTAGGGGCGGTGTCGGCACTGGTGCTGGCGATTCGAACGAGGTCGTTTTATAGGAGTGACATTTACAAGAGGTTTAGGGAGGACTTGACGGTGCCTAAGAGTGAGATGGAGTTTTATCGTCTGAATGTGAAGAAGATCAATAGTGATAAATTTGGGGGTAAGCGTTTTGAGAGTTTTAGGTGA 1650 47.58 MVGAGATYLFGSYSKMLKTTFDYNQKKINTMGFAKDLGSNMGIISGLLSEFVPDWGLLVLGGTTNFFSYFLMWLAVTHRSAQPKFWEMCTYIGIATNSQNFVNTAVLVSCVRNFPERRGIVLGLLKGFVGLSGAIMTQLYYAFYGPDQPGTLVLFLGWFPSVLCLIFVCTIRTVKPHYSENPNELRAFYQFLYMSILLAVILMVLGLTQKTTEFSQNAYVGGAAVIIVLLILPLVIAIREELEIWNNKKCISPATSVKSIDNEPRNEVPEEPLFIYSNIWDKPERGEDYTILQALFSKDMLLLIISIVLGSGSTLAAIDNLGQVCESLKYPTHSVGFILSLVSIWNFFGRILSGFLSEFLLDKYQFPRPLVLSIVFLISCMGHLIIAFPFSHSVYVASLLIGLTFGAEVTCLFSIVSELFGLRHFALLFNCMQMFVPIGSYLLNVEVIGILYDKEAVKGGAHLVTGRGLTCIGAHCFAQSFAILATVTFLGAVSALVLAIRTRSFYRSDIYKRFREDLTVPKSEMEFYRLNVKKINSDKFGGKRFESFR 549
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 9752160 9753809 + Conep11aG0137000.1 Cone11ag1324 448576
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cone11ag1324 549 Pfam Nodulin-like 2 238 IPR010658 -
Cone11ag1324 549 PANTHER UNCHARACTERIZED NODULIN-LIKE PROTEIN 3 515 - GO:0016020(PANTHER)
Cone11ag1324 549 SUPERFAMILY MFS general substrate transporter 6 506 IPR036259 -
Cone11ag1324 549 Gene3D MFS general substrate transporter like domains 182 487 IPR036259 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cone11ag1324 Cone-Chr11:9752160 Cone13ag1248 Cone-Chr13:9498851 2.99E-170 dispersed
Cone11ag1323 Cone-Chr11:9748372 Cone11ag1324 Cone-Chr11:9752160 1.86E-194 tandem
Cone11ag1324 Cone-Chr11:9752160 Cone18ag0251 Cone-Chr18:1226489 1.13E-49 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cone11ag1324 - - - 0.0