Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cone11ag1332 ATGGCTATGGCTCTGCTTCTTCCACAGTCTTCTCCTTCTTCTTCTTCTTCTTCTTCTTCTTCCTCGCTTCCGTTTTCGTCTTCCTTCTCCTTCAATCCAATCTCCTTTCACAAGCTCCTCTCCAATCTTTACTCGCTGCAACCTCGAAGAATTCAACTCACTCGATCCACTTCCATTTTCAAAGCTTCATGGCAAGAGCTTGCTGGAGTTCTTATATTCTCGGCGATTCCTTTCACGGCCGTAAAAGCACTCGCAAATAGCTCACTAGGTGAATCGCTGCAGAGGCGATTGCAAGAGAGGAAGAAATTTGCAGTGGAGAACTCTTCCAAGTTCAAGGCCTTAACTAAGGAAGCTAGGAATTATAGCTCTTGGTATGGAAAAGGACGTCCGCTCTGGCTTGGTCCGATACCATATGACTATCCCGATCATCTTACCGGAGAACTACCCGGTGACTATGGATTTGACATTGCAGGTCTAAGCAAGGATCCCATTGCTTTCCAGAAGTACTTCAACTTTGAAATATTGCATGCACGTTGGGCCATGCTGGCTGCCCTTGGGGTTCTTGTTCCAGAAGTACTAGACCTATTAGGAGTCTTTCACTTTGTCGAACCCATCTGGTGGAAAGTTGGCTATTCAAAGCTAAAGGGAGATACTCTAGACTACCTTGGAATCCCTGGGCTTCACATAGCTGGAAGCCAAGGAGTGATTGTCATTGCAATCTGCCAAGCCCTACTCATGGCTGGACCAGAATATGCAAGATATTGTGGGATTGAGGCCTTGGAGCCTCTAGGGATATACTTACCAGGTGATATTAACTATCCAGGAGGAGCATTGTTTGATCCTTTGAACCTGTCTAAGGATGCTGTAGCTTTTGAGGAGTTAAAGGTTAAGGAGATTAAGAACGGGCGATTAGCAATGGTTGCCTGGTTAGGGTTTTACGTTCAAGCGGCTTTGACCGGTAAAGGTCCGGTGCAGAATTTACTGGACCACATTTCCGATCCCTTCCATAATAACCTTCTTGCTTTGCTCAATTCCCTGTAA 1041 45.82 MAMALLLPQSSPSSSSSSSSSSLPFSSSFSFNPISFHKLLSNLYSLQPRRIQLTRSTSIFKASWQELAGVLIFSAIPFTAVKALANSSLGESLQRRLQERKKFAVENSSKFKALTKEARNYSSWYGKGRPLWLGPIPYDYPDHLTGELPGDYGFDIAGLSKDPIAFQKYFNFEILHARWAMLAALGVLVPEVLDLLGVFHFVEPIWWKVGYSKLKGDTLDYLGIPGLHIAGSQGVIVIAICQALLMAGPEYARYCGIEALEPLGIYLPGDINYPGGALFDPLNLSKDAVAFEELKVKEIKNGRLAMVAWLGFYVQAALTGKGPVQNLLDHISDPFHNNLLALLNSL 346
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 9782227 9784241 + Conep11aG0137800.1 Cone11ag1332 448584
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cone11ag1332 346 SUPERFAMILY Chlorophyll a-b binding protein 123 343 - -
Cone11ag1332 346 PANTHER CHLOROPHYLL A/B BINDING PROTEIN 59 342 IPR001344 GO:0009416(PANTHER)|GO:0009765(InterPro)|GO:0009768(PANTHER)|GO:0016020(InterPro)
Cone11ag1332 346 FunFam Chlorophyll a-b binding protein, chloroplastic 131 343 - -
Cone11ag1332 346 Gene3D Chlorophyll a/b binding protein domain 131 343 - -
Cone11ag1332 346 Pfam Chlorophyll A-B binding protein 141 316 IPR022796 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cone11ag1332 Cone-Chr11:9782227 Cone6ag0112 Cone-Chr6:539985 2.71E-66 dispersed
Cone11ag1332 Cone-Chr11:9782227 Cone9ag0132 Cone-Chr9:578039 9.61E-67 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cone11ag1332 K14172 - rcu:8269957 516.538