Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cone11ag1340 ATGTATTTTGAGAACTTAGCTCTTAAGATTAATGCGAAGGTTGGGGGCCGAAATTCGGTATTGAATGATGCGATTTTAAGAAGAATTCCTCATGTCACTGATCGCCCAACAATTATTTTTGGAGCGGATGTGACCCATCCACAACCTGGAGAGGATTCTAACCCTTCAATAGCTGCTGTTGTGGCATCAATGGACTGCCCAGGAGTGAAAAAGTACAAAGCACTTTTTTCTGCTCAGACTCACCGTGAAGAAATCATCAAAGATCTGTCCCCAACGACAGATCCTCAAAGGGGAGTGGTTAGCAAAGGAATGATCAAGGAGTTAATGAAGGCATTTAGAAGATCAACTAATCTTAAGCCAGAGAGAATCATATTCTACAGTCTATTGAAGTTGTTTGGTCTTTTATTTGACCGGGATGGTGTAAGTGAAGGTCAATTCAACCAGGTCCTGTTGCATGAGGTGCTTGCCATCAGAGAGGCATGTGCTTCTCTAGAGCCGGGATATCAACCTCCAATCACATTTGTTGTAGTCCAAAAACGACACCATACCCGCCTCTTTGCTACTGACCGTAAGAACACTGACAGGAGTGGAAACATAGTACCAGGAACTGTTGTTGACAGACAGATTTGTCATCCCACAGAGTTCGACTTCTACCCCAATAGTCATGCTGGAATTCAGGGTACAAGCCGGCCCACTCATTATCGCATCTTGCATGATGAAAATAATTTTAGCGCTGATGACATGCACCGATTAACATATAATCTCTGCTACACGTACGTGAGGTGCAATCGTTCCGTATCCATAGTGCCTCCAGCTTATTATGCTAACTTAGCAGCTTATCGGGCCCGCCATTTGATTGAGAATGATGCTTCTGATGGCGGTTCGACAAGCGGAAATAGGAATTTGGAAGTTCGGCCTCTTCCACGCATAAAGGAGAATGTCAAGGATGTGATGTTTTATTGCTGA 966 43.89 MYFENLALKINAKVGGRNSVLNDAILRRIPHVTDRPTIIFGADVTHPQPGEDSNPSIAAVVASMDCPGVKKYKALFSAQTHREEIIKDLSPTTDPQRGVVSKGMIKELMKAFRRSTNLKPERIIFYSLLKLFGLLFDRDGVSEGQFNQVLLHEVLAIREACASLEPGYQPPITFVVVQKRHHTRLFATDRKNTDRSGNIVPGTVVDRQICHPTEFDFYPNSHAGIQGTSRPTHYRILHDENNFSADDMHRLTYNLCYTYVRCNRSVSIVPPAYYANLAAYRARHLIENDASDGGSTSGNRNLEVRPLPRIKENVKDVMFYC 321
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 9820671 9822451 + Conep11aG0138600.1 Cone11ag1340 448592
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cone11ag1340 321 SUPERFAMILY Ribonuclease H-like 2 288 IPR012337 -
Cone11ag1340 321 ProSiteProfiles Piwi domain profile. 1 287 IPR003165 GO:0003676(InterPro)
Cone11ag1340 321 SMART Piwi_a_2 2 287 IPR003165 GO:0003676(InterPro)
Cone11ag1340 321 FunFam protein argonaute 10-like 28 321 - -
Cone11ag1340 321 Gene3D - 28 321 IPR036397 GO:0003676(InterPro)
Cone11ag1340 321 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 2C 2 288 - GO:0003723(PANTHER)|GO:0004521(PANTHER)|GO:0005737(PANTHER)|GO:0035194(PANTHER)
Cone11ag1340 321 Pfam Piwi domain 2 286 IPR003165 GO:0003676(InterPro)
Cone11ag1340 321 Gene3D - 1 24 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cone11ag1340 Cone-Chr11:9820671 Cone18ag0593 Cone-Chr18:2966035 1.95E-152 dispersed
Cone11ag1340 Cone-Chr11:9820671 Cone11ag1341 Cone-Chr11:9823795 1.38E-171 tandem
Cone11ag1340 Cone-Chr11:9820671 Cone18ag0238 Cone-Chr18:1166908 6.14E-170 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cone11ag1340 K11593 - csv:116403995 451.825