Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cone11ag1343 ATGGCGTTAACTCAGTGGCCGAATCTCCTTCACTTTCCTCTTCAATCTTCTTCTACATCGTCTGATTGCTACCGTTCTGTTCAAACTCCATGGATTCTGTCCTTCTCTGCGTCGCAGAAGAGTAAAATCGCGTTGGTTCCGTTTGTGTTGAAGTTTGCGTCGAGAGCGAAGTGCTTTGCCAAGTCCACAGAAGATGAGAGACGGAGTGGATCGGAAACTGCAGATGCTGATGTTGACGAAGTGAGACAGAAGGATCGCGATGATGACATCAGCACTGTTCAGCATCAGAGTTCTGTAGCTGCAGAAACTCCTCTGCAGAGGTTTCCGTCATCTTCGTCTAGTGATTACCTCTCGCTTGGTATTCGTGAGCCTGTTTACGAGGTCGTAGAAGTGAAGCCAGATGCAACAATATCTACTAGGAAGATTAGTAGACGTCAATTATTGAAGTCAAGCGGTCTACGTCCCCGCGACATTCGGAGTGTAGATCCGTCTTTATTTCTTACAAATTCCATGCCTTCTTTAGTGGTTCGTGAGCATGCTATTTTGCTCAATCTGGGTTCATTACGTGCAATAGCAATGAAGGAGCGTGTTCTCATATTTAACTACAACCGTAAAGGAGGGAAAGCCTTTATCGAGTCATTGTTGCCTCGATTGAACCCAAAAAACATTAACGGAGGACACACTATGCCATTTGAGCTCGAGGTTGTTGAAGCAGCTTTGCACTCACGGATACAACGTTTGGAAAATAAGCTTATGGACTTAGAACCTCGTGTTCAAGCTCTACTTGAGGTCCTCCCAAACCGATTAACGGCTGACGTATTGGAGCAACTTCGTATTAGCAAGCAAACGCTGGTTGAATTGGGTTCTAGGGCAGGGGCTCTCAAACAAATGATATTTGATCTTCTTGAAGACTCTGATGAAATACGTCGGATATGTATAATGGGAAGAAATTGCACGGTTAGGAAAGGAAATGGCGATATGGAGTGCTCTGTTCCTCTGGAAAAGCAGATTGCTGAGGAAGAGGAGGAAGAAATTGAAATGCTTCTGGAAAATTATCTTCAAAGATGTGAATCTTGTCACGGTCAGGCTGAAAGGCTTCTCGACTCTGCAAAAGAGATGGAAGATTCTATTGCTGTCAATTTGAGCTCGAGGAGGTTAGAGGTTAGCAGGGTAGAATTGCTTCTCCAAGTTGGGGCATTTTGTGTAGGAGTTGGTGCTTTAATTGCAGGTATATTTGGCATGAATTTGAGATCCTATTTAGAAGAACATGTGTTCGCATTTTGGCTGACAACAGCTGGGATTATTTTCGGCGCCGTCGTGGCGTTTTTCCTTATGTATTCATATGTTAAGGCAAGAAAAATTCTGTAA 1368 43.93 MALTQWPNLLHFPLQSSSTSSDCYRSVQTPWILSFSASQKSKIALVPFVLKFASRAKCFAKSTEDERRSGSETADADVDEVRQKDRDDDISTVQHQSSVAAETPLQRFPSSSSSDYLSLGIREPVYEVVEVKPDATISTRKISRRQLLKSSGLRPRDIRSVDPSLFLTNSMPSLVVREHAILLNLGSLRAIAMKERVLIFNYNRKGGKAFIESLLPRLNPKNINGGHTMPFELEVVEAALHSRIQRLENKLMDLEPRVQALLEVLPNRLTADVLEQLRISKQTLVELGSRAGALKQMIFDLLEDSDEIRRICIMGRNCTVRKGNGDMECSVPLEKQIAEEEEEEIEMLLENYLQRCESCHGQAERLLDSAKEMEDSIAVNLSSRRLEVSRVELLLQVGAFCVGVGALIAGIFGMNLRSYLEEHVFAFWLTTAGIIFGAVVAFFLMYSYVKARKIL 455
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 9838458 9842718 - Conep11aG0138900.1 Cone11ag1343 448595
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cone11ag1343 455 CDD Mrs2_Mfm1p-like 128 454 IPR039204 -
Cone11ag1343 455 PANTHER RNA SPLICING PROTEIN MRS2, MITOCHONDRIAL 92 454 IPR039204 GO:0009941(PANTHER)|GO:0015095(PANTHER)|GO:0015693(PANTHER)
Cone11ag1343 455 FunFam Magnesium transporter MRS2-11, chloroplastic 121 202 - -
Cone11ag1343 455 Pfam Magnesium transporter MRS2-like 130 385 - -
Cone11ag1343 455 MobiDBLite consensus disorder prediction 63 92 - -
Cone11ag1343 455 FunFam Magnesium transporter MRS2-11, chloroplastic 204 386 - -
Cone11ag1343 455 MobiDBLite consensus disorder prediction 63 96 - -
Cone11ag1343 455 Gene3D Magnesium transport protein CorA, transmembrane region 203 386 - -
Cone11ag1343 455 Gene3D - 123 202 - -
Cone11ag1343 455 Coils Coil 335 355 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cone11ag1343 Cone-Chr11:9838458 Cone18ag0237 Cone-Chr18:1158421 1.54E-272 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cone11ag1343 K16075 - csv:101219314 591.267