Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cone11ag1357 ATGGAAGGAGATACTGATCCAACAGGAGCTCAAAACCCTAGTAATGGAGGAGCAAAGCCGAAGGTGGTGGTAATACTGGGTCCCACCGGTTCAGGGAAGACCAAGCTGTCTATCGATTTGGCCTCTCACTTTCCGATCGAGATCATCAACGCCGACTCCATGCAAGTCTACCGCGGCCTCGACGTCCTCACCAATAAGGTCCCCTCACACGAGCAAAACGGAGTTCCTCATCATCTTTTGGGTACTGTAAGCCCTAACGTCGAATTTACAGCTAAAGAGTTTCGTGATTCTGCAATTTCTGTGGTTGATGAAATATTATCTCGCGATTGCTTGCCGGTTATAGTTGGGGGCACAAATTACTATATCCAGGCACTTGTAAGTCCGTTCCTTCTAGACGAATCAGCAGAAGATATGGGCGGAGACTGTTTGAATGATCCTGAGCCAGAGTACGAGTTGGATATCCAAAATGAGAGTTTCAAGTATAGCTTTAACCATCTGAAAGAGATTGACCCAATTGCAGCAAACAGAATCCATCCCAATGACAACAGAAAGATAAATCAATACCTCAGTTTGTATTTTCGCACTGGTTTTCTTCCTAGCAATTTTTTTCAAGGAAAAGCTGCCGAGAGGTGGGGTCAAGCTGATTATTTTAGATACGATTGCTGTTTCATATGTGTGGATGCATCTCTCTCTGTTCTAGATCAACAGGTGGATCAACGAGTAGACAAAATGGTGGATGCTGGATTACTTGACGAAGTTTTTGACATTTACAATCAGAATGCAGACTATACCCGTGGTTTGAGACAAGCCATTGGTGTTAGGGAATTTGAAGATTTTTTGGGACCTTACATACAAGAGACCAGATGTGATAGTGATTGTGAAATGATTGAGGGTTCCGAATTGTTGAAGTCAAATGATGAAACTGATAAGATCCTGAAAGAGAAAATGCAGGCAATTTTGAATTCATCAACTAATGAGCAACCAAAAATACTGTTAAAAGAAGCCATTGACAAAGTAAAGTTGAATACCCGAAGGCTTGTTCGTCGTCAGAGGAGAAGACTAAAGAGATTACAAACGTTATTTGGATGGAACATACATTACGTTGATGCGACTGAATATATATCATGTAAATTGGATGATTCATGGACTGTCCATGTGGTCGAACCTGCCATCAGATTAATTAGATCCTTCCTTAGCCGGAACACTAGTCCGATAAATGATTCAGAGGCACGACTTGGTTCCGCAACAAAAGTAATCCAGAGGGATCTGTGGACTCAGTATACATGCATGGCTTGTGGGGATAGAGTACTTAGAGGCGCACATGAATGGGAACAACATAAACAAGGCCGTGGACATAGGAAACGGATATCCCGGCTGAGGAAATTGGAGAGTTTCTCCTAA 1401 42.61 MEGDTDPTGAQNPSNGGAKPKVVVILGPTGSGKTKLSIDLASHFPIEIINADSMQVYRGLDVLTNKVPSHEQNGVPHHLLGTVSPNVEFTAKEFRDSAISVVDEILSRDCLPVIVGGTNYYIQALVSPFLLDESAEDMGGDCLNDPEPEYELDIQNESFKYSFNHLKEIDPIAANRIHPNDNRKINQYLSLYFRTGFLPSNFFQGKAAERWGQADYFRYDCCFICVDASLSVLDQQVDQRVDKMVDAGLLDEVFDIYNQNADYTRGLRQAIGVREFEDFLGPYIQETRCDSDCEMIEGSELLKSNDETDKILKEKMQAILNSSTNEQPKILLKEAIDKVKLNTRRLVRRQRRRLKRLQTLFGWNIHYVDATEYISCKLDDSWTVHVVEPAIRLIRSFLSRNTSPINDSEARLGSATKVIQRDLWTQYTCMACGDRVLRGAHEWEQHKQGRGHRKRISRLRKLESFS 466
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 9903613 9905985 - Conep11aG0140600.1 Cone11ag1357 448609
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cone11ag1357 466 PANTHER TRNA DIMETHYLALLYLTRANSFERASE 21 409 IPR039657 GO:0005739(PANTHER)|GO:0006400(PANTHER)|GO:0052381(PANTHER)
Cone11ag1357 466 MobiDBLite consensus disorder prediction 1 21 - -
Cone11ag1357 466 Gene3D - 147 206 - -
Cone11ag1357 466 Gene3D - 20 422 IPR027417 -
Cone11ag1357 466 Hamap tRNA dimethylallyltransferase [miaA]. 22 375 IPR018022 GO:0008033(InterPro)|GO:0052381(InterPro)
Cone11ag1357 466 Gene3D Classic Zinc Finger 423 466 - -
Cone11ag1357 466 FunFam tRNA dimethylallyltransferase 422 465 - -
Cone11ag1357 466 NCBIfam tRNA (adenosine(37)-N6)-dimethylallyltransferase MiaA 22 282 IPR018022 GO:0008033(InterPro)|GO:0052381(InterPro)
Cone11ag1357 466 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 19 261 IPR027417 -
Cone11ag1357 466 Pfam IPP transferase 55 355 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cone11ag1357 Cone-Chr11:9903613 Cone7ag0211 Cone-Chr7:902172 9.54E-59 dispersed
Cone11ag1357 Cone-Chr11:9903613 Cone18ag0221 Cone-Chr18:1086778 2.09E-133 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cone11ag1357 K00791 - csv:101202758 610.142