Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cone11ag1360 ATGAAGGTTCTGTTCAATAGAGTGCTGACCAATCTAGAATCACCAGTTCGCTTCCATTCTCACTCTTCTTCTTCATCATCATCGCCTCCATCTCTTCTTCTCCTTCAGCTAGTAATCCAATACCCACATCTTGAAAACTCAGCCTCTTCTTCTCCAAAACCCCACAAACTCCACCTGTCTTCTCCATTTCTAACCAGAGCTTCAATGGCTGCTGCTTCTAGTAATCCATCAGATACAGAGACCAAAAAGCCCTTTTCTGTTCTGTTTGTGTGTTTGGGCAACATCTGCAGAAGCCCAGCTGCTGAAGGAGTTTTCACGGACTTGGTCAAGCAAAGGGGTTTAGATTTCAAGTTCAAGATTGATTCTGCAGGCACCATTAACTACCACGAGGGGAACCCAGCGGATCCAAGAATGAGAGCGGCCTCAAAGAGTAGAGGGATAGAGATAACATCTATCTCGAGGCCGCTCCGGCCCTCCGATTTTAGAGATTTTGATCTTATTCTTGCAATGGACAAGCAAAACAGAGAGGATATATTGGAGGCTTATGAGAGGTGGAGATTCAGAGAAACCTTCCCTCCTGAAGCACACAAAAAGGTGAAGCTGATGTGTTCTTATTGCAAGAAACATGGTGAAACTGAAGTTCCGGATCCTTATTATGGTGGAGCACAAGGTTTCGAGAAGGTATTGGACTTGCTTGAAGATGCCTGTGAATCACTCCTGGATAGCATCTTGATAGAGAACAAACATATTCTGGATTCTTAA 762 44.23 MKVLFNRVLTNLESPVRFHSHSSSSSSSPPSLLLLQLVIQYPHLENSASSSPKPHKLHLSSPFLTRASMAAASSNPSDTETKKPFSVLFVCLGNICRSPAAEGVFTDLVKQRGLDFKFKIDSAGTINYHEGNPADPRMRAASKSRGIEITSISRPLRPSDFRDFDLILAMDKQNREDILEAYERWRFRETFPPEAHKKVKLMCSYCKKHGETEVPDPYYGGAQGFEKVLDLLEDACESLLDSILIENKHILDS 253
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 9910446 9911667 - Conep11aG0140900.1 Cone11ag1360 448612
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cone11ag1360 253 CDD LMWPTP 86 241 - -
Cone11ag1360 253 Pfam Low molecular weight phosphotyrosine protein phosphatase 87 240 IPR023485 -
Cone11ag1360 253 FunFam Low molecular weight protein-tyrosine-phosphatase 84 248 - -
Cone11ag1360 253 SUPERFAMILY Phosphotyrosine protein phosphatases I 83 243 IPR036196 -
Cone11ag1360 253 Gene3D - 67 247 - -
Cone11ag1360 253 PRINTS LMW phosphotyrosine protein phosphatase signature 87 104 IPR017867 GO:0004725(InterPro)|GO:0006470(InterPro)
Cone11ag1360 253 PRINTS LMW phosphotyrosine protein phosphatase signature 214 229 IPR017867 GO:0004725(InterPro)|GO:0006470(InterPro)
Cone11ag1360 253 PRINTS LMW phosphotyrosine protein phosphatase signature 130 146 IPR017867 GO:0004725(InterPro)|GO:0006470(InterPro)
Cone11ag1360 253 PANTHER LOW MOLECULAR WEIGHT PHOSPHOTYROSINE PROTEIN PHOSPHATASE-RELATED 67 248 IPR052995 -
Cone11ag1360 253 SMART LMWPc_2 85 242 IPR023485 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cone11ag1360 Cone-Chr11:9910446 Cone18ag0218 Cone-Chr18:1079711 1.03E-164 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cone11ag1360 K25307 - vvi:100253402 325.865