Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Cone11ag1370 | ATGGAATTTCTAGAGTCCATGGCAACGACTTTCTGCATCGTCTTCTTCTCCTTCACGGGCATCTTCTCTGCCTTCTCTCTGTTCGTCTTCATCACGAGAATCAGACCGTGGTGCAACTGCGAAGTCTGCAAAGACTACATGTCCTGTAGCTGGATGAAGCGACACGACAATTTCTGCGACTGGTATTCTCACCTTCTCAGAAAATCCCCAACCGGAACCATCCACGTTCATGTCCTCGGCAACATCATCACGGCAAACCCAGAAAATGTCGAGTACATTTTGAAGACCAATTTCGCAAACTACCCAAAAGGCAAGCCCTTTTCTGCAATCCTCGGCGATCTTTTGGGCCGCGGCATCTTCAACGTCGACGGCGATTCCTGGAAATTCCAACGAAAGATGGCCAGTTTAGAACTCGGCAGCGTTTCCGTTCGTTCCTACGCGTTTGATATCGTCGGTTCCGAGATCCAATCGCGATTAATTCCTCTTCTCGCTGAATTTTCCGCCAAAAAAAGTGGTGCGGATTCCAACGGTCATTTGGATTTACAAGACGTTTTCCGACGGTTTTCTTTCGACAGTATTTGCAAATTTTCGTTTGGGTTGGACCCGGGTTGTCTCAAACTGTCGTTTCCGGTTTCGGATTTGGCGGTTGCATTTGATTTAGCGTCGAGGCACTCCGCCGAGCGAGGAATGTCTCCGTCGCCGATTATTTGGAAAATCAAACGGGCATTGAATTTAGGAGCTGAGAAGAAATTGAAAGAAGCTATTAAAGTGGTTGATGCTTTTGCCAAGGAAATGCTCGAACTGCGACGGAAACTGGGTTTCTCGAATCAAAACGATCTCCTTTCACGGTTCATGGGTTCGATAGACAACGACGTTTTTCTACGAGATATAGTTGTCAGCTTCCTATTGGCTGGTCGTGATACGGTGGCTTCCGCGTTGACTAGTTTTTTCTGGTTGTTATCACAGAACCCGGATGTTGAATCCAAGATATTGGAAGAGTCAAACCGGGTCATCGGTTCGGGTAATTTGGACAAGCCCGCTAGCTATGAAAATATCCGACAAATGCATTATTTGCATGCGGCCGTTCACGAGAGTATGAGACTTTATCCTCCGGTTCAATTCGATTCCAAATTTGCTGAAGACGACGACGTTTTACCGGATGGGACTTTTGTGCAAAAGGGTACAAGGGTAACTTACCATCCCTACGCAATGGGAAGGATGGAGCGGGCGTGGGGCCCGGATTGTTTGGAGTTCAAGCCAGACAGATGGTTGAAGAACGGGGTTTTCTCGCCCGAGAATCCGTTTAAGTATCCGGTATTTCAAGCCGGGTCGAGGGTTTGTTTGGGAAAAGAATTGGCACTCATGGAGATGAAAAGTGTAGTTGCAGCTCTCGTAAGACAGTTTAAAATACGAGCTGTTGGATCAGATCGGTTTCCCCGGTTCGCCCCGGGTCTCACTGCTACCTTTCGAGTGGGGCTTCCGGTCCAAATCGAAGAAAGAATAACGTGA | 1509 | 47.71 | MEFLESMATTFCIVFFSFTGIFSAFSLFVFITRIRPWCNCEVCKDYMSCSWMKRHDNFCDWYSHLLRKSPTGTIHVHVLGNIITANPENVEYILKTNFANYPKGKPFSAILGDLLGRGIFNVDGDSWKFQRKMASLELGSVSVRSYAFDIVGSEIQSRLIPLLAEFSAKKSGADSNGHLDLQDVFRRFSFDSICKFSFGLDPGCLKLSFPVSDLAVAFDLASRHSAERGMSPSPIIWKIKRALNLGAEKKLKEAIKVVDAFAKEMLELRRKLGFSNQNDLLSRFMGSIDNDVFLRDIVVSFLLAGRDTVASALTSFFWLLSQNPDVESKILEESNRVIGSGNLDKPASYENIRQMHYLHAAVHESMRLYPPVQFDSKFAEDDDVLPDGTFVQKGTRVTYHPYAMGRMERAWGPDCLEFKPDRWLKNGVFSPENPFKYPVFQAGSRVCLGKELALMEMKSVVAALVRQFKIRAVGSDRFPRFAPGLTATFRVGLPVQIEERIT | 502 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 11 | 9950948 | 9952456 | - | Conep11aG0141900.1 | Cone11ag1370 | 448622 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Cone11ag1370 | 502 | Coils | Coil | 251 | 271 | - | - | |
| Cone11ag1370 | 502 | CDD | CYP86A | 76 | 473 | - | - | |
| Cone11ag1370 | 502 | Pfam | Cytochrome P450 | 70 | 472 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cone11ag1370 | 502 | PRINTS | E-class P450 group I signature | 359 | 377 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cone11ag1370 | 502 | PRINTS | E-class P450 group I signature | 437 | 447 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cone11ag1370 | 502 | PRINTS | E-class P450 group I signature | 293 | 310 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cone11ag1370 | 502 | PRINTS | E-class P450 group I signature | 313 | 339 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cone11ag1370 | 502 | PRINTS | E-class P450 group I signature | 447 | 470 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cone11ag1370 | 502 | PANTHER | CYTOCHROME P450 | 38 | 489 | - | - | |
| Cone11ag1370 | 502 | PRINTS | P450 superfamily signature | 360 | 371 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cone11ag1370 | 502 | PRINTS | P450 superfamily signature | 304 | 321 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cone11ag1370 | 502 | PRINTS | P450 superfamily signature | 447 | 458 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cone11ag1370 | 502 | PRINTS | P450 superfamily signature | 438 | 447 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cone11ag1370 | 502 | SUPERFAMILY | Cytochrome P450 | 54 | 500 | IPR036396 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cone11ag1370 | 502 | Gene3D | Cytochrome P450 | 48 | 502 | IPR036396 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Cone11ag1370 | Cone-Chr11:9950948 | Cone16ag0020 | Cone-Chr16:148165 | 1.95E-139 | dispersed | |
| Cone11ag1370 | Cone-Chr11:9950948 | Cone13ag1195 | Cone-Chr13:9264743 | 1.12E-215 | wgd | |
| Cone11ag1370 | Cone-Chr11:9950948 | Cone18ag0213 | Cone-Chr18:1052733 | 0 | wgd | |
| Cone11ag1370 | Cone-Chr11:9950948 | Cone19ag1179 | Cone-Chr19:8279317 | 1.17E-212 | wgd |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Cone11ag1370 | K20624 | - | gmx:100813091 | 717.998 |