Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cone11ag1428 ATGGGTGTCTCGGGAAAATGGATTAAAAACTTGGTCGGTTTTAAAAAATCCGAAAAATCGCCCTCTTCAGAGAAGGGTGAAAATAAAACATCTGGAATCAAGTTTCTGCATCGGGGAAAGAATTCGGTTGAGATTGATGCAGACACACAGAAATACGGGTTTGATCAACAGTATAGCCCATTAGTTGGAGAAGTTAAAACCCATTCAAATTCAGATGCTGCTGGTTCACCTTCTAATTCAATTCCCTTACGTGAAAAGTCACATAGTCAGCTGATTGATAGAGAAGAATGGGCTGCTACACGCATCCAAACAGCGTTCCGAGGATTTCTGGCTAAAAGAGCACTCCGAGCTTTGAAAGGATTAGTAAGACTTCAAGCTCTTGTCAGGGGACATGCTGTCAGAAAACAAGCTGCTATAACTCTTCGCTGTATGCAAGCTTTAGTTAGAGTCCAGGCTCGTGTACGTGCAAGGCATGTTCGTCTTGCACTAGAAAGTGAAACAGTGCAACAAAAACTTCAACAACAACATGAAAATCAAGCTCATGTTCGAGAAATCGAAGAAGGGTGGTGTGATGGTGCGGGATCAGTCGAACAAATTCAAGCCAAGTTGTTGAAGAGGCAGGAGGCTGCAGCTAAGCGCGAGAGAGCCATGGCATATGCTCTAGCTCATCAGTGGCAAGCAGGATCAAGGCAGCGATCTACTCCTGGGTTTGAACCTGATAAAAGTGGGTGGGGTTGGAATTGGTTGGAAAGATGGATGGCTGTTCGTCCATGGGAAAACCGTTTTCTAGATATTAATCTAAGAGATGGAATGACGGGAAGTAATAATGAATCAGTTGAAGGTAAAAATAATAATGGCATTCAATCTCAGGTAAAACCTGCTACTGGCAAGAAACCAAATGTATCAACTGTTCATTCAAATATCTCAAGCCAGAAAACAGGCCCCTCCCACTCAGATGGATGTGGTTCCTCCTCACCAAACAAGTCGGCAAGCACAGTAGAACAGAACGGGGCGCAGTTTTCAAAGCCAAAGTTCAAGCCTCTTGATGAAAATACTGTAAAAGAAGCCAACTCAAGATCCAAAAGTAATCCGAAAGAGAGATCCAGAATACCCAATAAACCAGCCAAAAAGCGTTTATCTCTTCCTAATAGCGGTGGAAGTCCCAGAACCCTGGCTCTCTTTCAAGGATAA 1191 43.41 MGVSGKWIKNLVGFKKSEKSPSSEKGENKTSGIKFLHRGKNSVEIDADTQKYGFDQQYSPLVGEVKTHSNSDAAGSPSNSIPLREKSHSQLIDREEWAATRIQTAFRGFLAKRALRALKGLVRLQALVRGHAVRKQAAITLRCMQALVRVQARVRARHVRLALESETVQQKLQQQHENQAHVREIEEGWCDGAGSVEQIQAKLLKRQEAAAKRERAMAYALAHQWQAGSRQRSTPGFEPDKSGWGWNWLERWMAVRPWENRFLDINLRDGMTGSNNESVEGKNNNGIQSQVKPATGKKPNVSTVHSNISSQKTGPSHSDGCGSSSPNKSASTVEQNGAQFSKPKFKPLDENTVKEANSRSKSNPKERSRIPNKPAKKRLSLPNSGGSPRTLALFQG 396
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 10201611 10204973 - Conep11aG0147700.1 Cone11ag1428 448680
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cone11ag1428 396 FunFam IQ-domain 11 94 145 - -
Cone11ag1428 396 MobiDBLite consensus disorder prediction 274 396 - -
Cone11ag1428 396 MobiDBLite consensus disorder prediction 67 87 - -
Cone11ag1428 396 MobiDBLite consensus disorder prediction 67 86 - -
Cone11ag1428 396 Gene3D - 92 146 - -
Cone11ag1428 396 ProSiteProfiles IQ motif profile. 119 146 - -
Cone11ag1428 396 ProSiteProfiles IQ motif profile. 95 123 - -
Cone11ag1428 396 PANTHER IQ-DOMAIN 5-RELATED 5 369 - -
Cone11ag1428 396 Pfam IQ calmodulin-binding motif 97 116 IPR000048 GO:0005515(InterPro)
Cone11ag1428 396 MobiDBLite consensus disorder prediction 274 339 - -
Cone11ag1428 396 MobiDBLite consensus disorder prediction 347 370 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cone11ag1428 Cone-Chr11:10201611 Cone20ag0275 Cone-Chr20:1221713 2.19E-47 dispersed
Cone1ag0388 Cone-Chr1:3380608 Cone11ag1428 Cone-Chr11:10201611 3.71E-141 wgd
Cone11ag1428 Cone-Chr11:10201611 Cone14ag1038 Cone-Chr14:8768237 1.38E-26 wgd
Cone11ag1428 Cone-Chr11:10201611 Cone18ag0162 Cone-Chr18:847631 1.10E-229 wgd
Cone11ag1428 Cone-Chr11:10201611 Cone5ag1312 Cone-Chr5:7581605 7.19E-131 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cone11ag1428 - - - 0.0