Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cone11ag1448 ATGGCAGCACAAGCATTGGTTTCCTCATTGCTTAGCTCTTCAGTCAAATTAGGAGGAAAAGCAGTCCAATCTCCATTTGGGTCTTCTAGAAGATCATCCTCCTTTGTAGTCAGAGCTGAGTCCACTCCCCCTGCTAAGCAAGGAGCAGATAGACAATTGTGGGCAGCATCCAAGCAAAGTCTTTCTTACTTGGACGGCAGCCTTCCAGGTGATTTTGGGTTTGACCCATTGGGCCTGTCAGACCCAGAAGGAGCAGGAGGGTTCATCGAGCCCAGATGGCTAGCCTATGGTGAGATCATCAACGGAAGGTTCGCCATGTTGGGAGCAGCAGGAGCCATAGCACCAGAAATTTTTGGGAAACTGGGCCTGATCCCTGAAGAGACGGCTCTTCCTTGGTTCAAAACTGGAGTGATCCCACCAGCTGGGACCTACAACTACTGGGCCGACAATTATACCCTCTTCGTGTTGGAGATGGCCTTGATGGGCTTCGCTGAGCACAGAAGGTTCCAAGACTGGTCCAAACCAGGGTCCATGGGTAAGCAATATTTCTTGGGCTTTGAGAAATATTTGGGTGGGTCGGGTGAACCGGCTTACCCTGGTGGGCCTCTGTTTAACCCACTTGGGTTTGGAAAAGATGAGAAATCATTGAAGGAGTTGAAGCTCAAGGAAGTGAAGAATGGAAGGTTGGCTATGTTGGCAATATTGGGCTACTTTATTCAGGCCCTAGTTACAGGTGTTGGGCCTTTCCAAAATCTGTTGGACCACTTAGCTGACCCAGTTAACAACAACATCTTGACCAGCCTCAAGTTTCATTAG 816 49.14 MAAQALVSSLLSSSVKLGGKAVQSPFGSSRRSSSFVVRAESTPPAKQGADRQLWAASKQSLSYLDGSLPGDFGFDPLGLSDPEGAGGFIEPRWLAYGEIINGRFAMLGAAGAIAPEIFGKLGLIPEETALPWFKTGVIPPAGTYNYWADNYTLFVLEMALMGFAEHRRFQDWSKPGSMGKQYFLGFEKYLGGSGEPAYPGGPLFNPLGFGKDEKSLKELKLKEVKNGRLAMLAILGYFIQALVTGVGPFQNLLDHLADPVNNNILTSLKFH 271
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 10307402 10308956 + Conep11aG0149700.1 Cone11ag1448 448700
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cone11ag1448 271 Gene3D Chlorophyll a/b binding protein domain 52 270 - -
Cone11ag1448 271 Pfam Chlorophyll A-B binding protein 62 241 IPR022796 -
Cone11ag1448 271 PANTHER CHLOROPHYLL A/B BINDING PROTEIN 12 266 IPR001344 GO:0009416(PANTHER)|GO:0009535(PANTHER)|GO:0009765(InterPro)|GO:0009768(PANTHER)|GO:0010287(PANTHER)|GO:0016020(InterPro)
Cone11ag1448 271 SUPERFAMILY Chlorophyll a-b binding protein 51 267 - -
Cone11ag1448 271 FunFam Chlorophyll a-b binding protein, chloroplastic 52 270 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cone11ag1448 Cone-Chr11:10307402 Cone7ag1381 Cone-Chr7:9960799 2.42E-53 dispersed
Cone11ag1448 Cone-Chr11:10307402 Cone18ag0141 Cone-Chr18:736092 6.73E-197 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cone11ag1448 K08909 - csv:101202993 451.44