Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cone11ag1461 ATGTCACGAGCCGAGGAGTTGTGGGAGCGGTTGGTACATGCTGCTTTAAGAAGGGAGAGAACTGGGGCAGATGCTTATGGGAGACATGGTGGGGGCATTGCAAGAAATGTCCCCTCTTCACTTTCAAACAACAGGGATATTGATGAGATATTAAGAGCTGCAGATGAAATCCAAGATGAAGCCCCTAACGTCTCTAGAATTTTATGTGAGCATGCTTATTCACTGGCTCAGAACTTGGATCCAAATAGTGAAGGAAGAGGCGTTTTGCAATTTAAAACTGGTTTAATGTCTGTCATCAAGCAAAAACTAGCTAAAAAGGATGGGGGAACGATAGACAGAAGCCAGGACATTGCACTTTTACAAGAGTTCTATAAATTTTATAGAGAGAGAAATAATGTAGATAAACTCCGAGAGGATGAAATGAAGTTGAGAGAGTCTGGAATTCTCAGTGGCAACCTTGGAGAGTTGGAAAGAAAGACACTAAAGAGAAAAAGAGTTTTTGCCACCCTGAAAGTATTAGGGATGGTGTTGGAGAAACTCACCAAGGAAATTCCTGAAGATTTAAAAAAGGTCATGGAGTCGGACGCAACGATGACAGATGATCTAGTTGCATATAATATCATCCCACTTGACGCTCCTACCATAACAAATACTATTGTGTCCTTGGCTGAGGTGCAAGCGGCTGTATCAGCCTTAAAGTACTTCAGTGGCCTTCCAAAGCTGCCTGAGGATTTTCCTATCCCAATTACAAGGAATCCTGATATGCTTGATTTTCTGCACTATGTATTTGGATTTCAGAAAGACAATGTTTCTAACCAGCGAGAACATGTGGTTCACCTCCTTGCGAATGCTCAATCTCAGCTTCGTATTCCTGAAGAAACTGAGCCTAAATTGGATGAGGAAGCTGTCCTGAGGGTCTTTTTGAAGTCCCTCGACAACTACATGAAATGGTGCAACTATTTGTGCATTCAGCCTGTTTGGAGCAGTTTGGAGTCGGTCAGTAAGGAAAAGAAGTTGCTGTTTGTTTCCTTGTACTTTCTTATATGGGGCGAAGCATCCAACGTCAGATTTCTTCCAGAATGCTTGTGTTACATATTTCACCACATGGTAAGGGAGATGGATGAAATATTAAGACAGGGGGATGCTCATCCAGCAAATAGTTGCAAGACGGAGAATGGCGTGTCTTTCCTTGACCAAGTTATATCTCCTCTCTATGAGGTTGTTGCTGCGGAAGCTGCTAGCAATAACAATGGCAAAGCGCCACACTCTGCCTGGAGAAATTATGATGATTTTAACGAGTATTTTTGGTCACTTCATTGCTTTGAACTCAGTTGGCCATGGCGGAGAAGTTCTTCCTTTTTCCTAAAGCCAGCATCCAAGTCAAAGAACATGGTTGGGCGGAGTCAACGTCGGGGGAAGACTTCATTTGTTGAGCACCGGACTTTTCTTCATCTCTATCATAGTTTCCATCGCCTGTGGATTTTTCTGGTTATGATGTTTCAGGCTCTTGCCATCATTGCATTTAATGATGATAAGCTAAATGCTAAGACTCTTCGGCAAGTTCTAAGTCTCGGTCCCACTTTTGTTTTGATGAAGTTCTTGGAGAGTGTTTTGGATCTTCTCATGATGTATGGTGCATATTCTACTTCAAGGCGTCTAGCTGTGACTCGGATTTTTATCCGTTTCCTTTGGTTTAGTTTTGCCTCAGCTCTCATAACCTTCCTATATGTGAAAGCTCTCCAGGAACAGAGTAAACAAAATGCTGATTCTGTTATATTCAGACTTTATCTTATCATTGTAGCCATATATGCCGGTTTACAGATCTTTCTAAGTATTCTCATGCGCATACCTGCTTGCCATCTCTTGACAAATCAATGTGATCGCTGGTCTTTGATTCAATTTATAAAGTGGATGCGACAGGAACGGTATTATGTCGGACGTGGCATGTATGAGAGGACTACTGATTTTATCAAGTACATGCTGTTTTGGCTTGTCATTTTGGGAGGAAAATTTACATTTGCCTACTTTCTCCAGATTAGGCCTCTTGTGAAACCCACAAAGCTTATAGTAACATTGCCTACTATCCAGTATTCTTGGCATGACATTGTGTCCAAAAATAATTATAATGCATTCACAGTCCTTAGCTTATGGGCCCCAGTGATATGTATATACCTCTTGGATATTCATGTGTTCTACACTGTAATGTATGCTATTTTGGGATTCTTACTTGGCGCAAGATCTCGTCTTGGTGAGATTAGATCATTGGAAGCCCTTCACAAACTTTTTGAGCAGTTTCCTGGGGCTTTTATGGATAATCTTTATGTTCATTCTCCTAACAGGCATTCCTCCCAGTTTCCCGATGAGGTTCTTGAGAGGAACAAGATTGATGCTGCTCAATTCTCGCCATTTTGGAATGAAATTATAAGAAATTTGCGGGAAGAAGATTATATAACAAACTTGGAAAAGGAATTACTTGAGATGCCTAAAAATTCTGGGACGCTCTCCCTGGTTCAGTGGCCCCTTTTTCTTCTTGCCAGCAAGATATTTCTGGCTAAAGATATCGCTGTAGAGTGTCGAGATTCACAGGATGAACTATGGGAAAGGATTTCAAGAGATGACTATATGCAGTATGCTGTACAGGAATGTTACTACACCCTTAAGCTGATCCTAGCAGCAATATTAGATGATGAGGGAAAGATGTGGGCTGAGAGGGTATATGATGAGATTCAAGGAAGGCTTGGGAATAGGAATATCATTGTTGACTTTCAACTTAAGAAGCTACCACTTGTGATTTCTAGAGTTACTGCACTCATGGGTATTCTGAAAGAGGGAGAAACTTCGGAAACACAAAAAGGTGCTGTGAAGGCAGTCCAAGATCTCTATGATGTTGTACACCACGATGTCTTCTCTTTGAACCTGAGGGGAAACTTTGAGACATGGAATACATTGACAAAAGCCAGGAATGAAGGTCGTCTGTTTTCCAAATTGAAGTGGCCTGCTAATCCAGAATTGAAATTACAAGTCAAAAGATTGTATTCGCTGTTGACTATCAAAGATTCAGCTTCAAATGTTCCAAAGAATCTTGAGGCCAGGCGCAGGCTCCAATTCTTCACAAATTCACTCTTCATGGAGATGCCAGTTGCCAAACCTGTCCGTCAAATGTTGTCCTTCAGTGTATTCACTCCTTATTATTCAGAGACTGTGCTTTATAGCAGGGAAGAACTTGAGAAGAAAAATGAGGATGGAATTTCAGTTTTGTTTTACCTACAAAAGATTTTCCCAGATGAGTGGAGGAACTTTCTAGCTCGAATTAATCGTAATGAAAATGAAGTTGACTTGGATCAATTTGATGAAAATGAGATTCTTGAAGTGCGATTTTGGGCCTCTTACCGGGGGCAAACATTAGCTAGAACTGTTCGCGGGATGATGTACTATAGGAAAGCTTTAATGTTGCAGACCTATTTGGAGAGAATGACTTCAGCAGATGTCGAAGCTGCTGTTTCTACTGCCAATTCTATGGATACTCAGGGTTTTGAGCTATCTCCTGAAGCGAGGGCTCATGCAGATCTTAAGTTTACATATGTAGTGACATGCCAAATATATGGAAAACAAAAGGAAGAAGGAAAACCTCAGGCTGCTGACATTGCAATGCTTATGCAAAGAAATGAAGCTCTTCGCATCGCTTTTATCGATATCGTTGAAACTTTAAAAGATGGTAACGTACGCACAGAATACTACTCAAAGCTCGTAAAGGCTGATATCAATGGGACAGACAAGGAAATCTACTCTATCAAATTGCCAGGAAATCCAAAACTGGGTGAAGGGAAACCTGAGAATCAAAATCATGCTGTTGTATTTACTCGTGGGAATGCTGTCCAGACAATTGATATGAATCAGGATAATTACTTTGAAGAAGCATTGAAGATGAGAAATCTTCTCGAGGAATTCAATCATGATCATGGTATCCATCCACCTACCATACTAGGTGTTAGAGAACATGTATTTACTGGAAGTGTCTCTTCTCTTGCTTCTTTCATGTCAAATCAAGAAACTAGCTTTGTGACTCTTGGTCAGCGAGTTCTGGCTACGCCTTTAAAGGTTCGTATGCATTATGGTCATCCAGATGTTTTTGATAGAGTTTTCCACATAACACGTGGGGGAATCAGCAAATCCTCCCGTGTTATCAACATTAGTGAAGATATCTTTGCCGGATTCAATACGACTTTACGTCAAGGGAATGTGACCCATCATGAATATATTCAGGTTGGTAAAGGACGAGATGTGGGGCTCAATCAGATTGCCATATTTGAAGGGAAGGTCGCTGGTGGTAATGGAGAACAAGTTCTTAGTCGAGACGTGTATAGGCTCGGGCAGCTCTTTGATTTTTTCCGGATGATGTCATTCTACTTCACAACTGTTGGATTCTATTTCTGTACAATGTTAACAGTGCTGACTGTGTACGTCTATCTCTATGGGAAAACATATCTGGCACTATCTGGAGTTGGCGAGGCTCTTGAGTTGACAGCTAAAGTAAATGATAACACTGCCCTGACAGCTGCTCTAAATACACAGTTTCTCATTCAAATTGGTATTTTCACGGCCGTTCCAATGATATTGGGTTTCATATTGGAGCAGGGTTTTCTCAGGGCTATTGTCAGTTTTGTCACGATGCAACTTCAGCTTTGCTCTGTCTTCTTCACTTTCTCTTTGGGCACAAGAACACATTATTTTGGTCGTACTATTCTTCATGGTGGTGCAAGGTACCAAGCAACTGGAAGGGGGTTTGTGGTTCGTCATATAAAATTTGCCGAGAATTACAGACTTTATGCTAGAAGCCATTTTGTCAAAGGATTTGAAATTGTCCTTTTGTTGGTTGTGTACATTGCCTATGGTTACAACTCTGGTGGAGCTTTTGCCGTCATCCTTGTCACAGTTAGCAGTTGGTTTATGGCATTATCGTGGCTTTTCGCTCCCTACATGTTTAATCCAGCTGGATTTGAGTGGCAAAAGACCGTGGAAGATTTCAGAGATTGGACAAATTGGCTTCTTTACCGAGGTGGGATTGGAGTCAAGGGTGAAGAAAGCTGGGAAGCATGGTGGGATGAAGAATTGGCACATATTCGAACCTTTGGAGGGAGAATCGCGGAGACTATTTTAAGTCTGAGATTTTTTATTTTTCAATATGGGATTGTTTACAAGCTCAAGGTGCAACACTACAATACGTCATTAACGGTATATGGACTTTCCTGGGCTGTGCTAGCGGGGCTTATTGTTCTTTTCAAGGTGTTTACCTTCAGCCAGAAGATCTCTGTAAATTTTCAGCTTCTGTTGCGCTTCATACAAGGCCTCTCCTTCCTAATGGCGATTGCTGGCTTAGCCGTGGCTATTGTACTTACCGATTTGACTATCACAGATGTACTTGCGTCCATTCTTGCATTTTTACCCACCGGATGGGGAATTCTTTCCATTGCTGCAGCTTGGAAGCCTTTGATAAAGAAGATAGGATTATGGAAGTCTGTCCGGTCTATTGCCCTCCTGTATGATGCCACAATGGGAATGCTCATCTTCATACCCATTGCCTTGTTTTCATGGTTCCCTTTTATATCGACCTTCCAAACCAGACTCATGTTCAACCAGGCATTCAGCCGAGGCTTGGAAATCTCACTCATCCTTGCCGGAAACAACCCCAACACAGGCATATGA 5703 41.57 MSRAEELWERLVHAALRRERTGADAYGRHGGGIARNVPSSLSNNRDIDEILRAADEIQDEAPNVSRILCEHAYSLAQNLDPNSEGRGVLQFKTGLMSVIKQKLAKKDGGTIDRSQDIALLQEFYKFYRERNNVDKLREDEMKLRESGILSGNLGELERKTLKRKRVFATLKVLGMVLEKLTKEIPEDLKKVMESDATMTDDLVAYNIIPLDAPTITNTIVSLAEVQAAVSALKYFSGLPKLPEDFPIPITRNPDMLDFLHYVFGFQKDNVSNQREHVVHLLANAQSQLRIPEETEPKLDEEAVLRVFLKSLDNYMKWCNYLCIQPVWSSLESVSKEKKLLFVSLYFLIWGEASNVRFLPECLCYIFHHMVREMDEILRQGDAHPANSCKTENGVSFLDQVISPLYEVVAAEAASNNNGKAPHSAWRNYDDFNEYFWSLHCFELSWPWRRSSSFFLKPASKSKNMVGRSQRRGKTSFVEHRTFLHLYHSFHRLWIFLVMMFQALAIIAFNDDKLNAKTLRQVLSLGPTFVLMKFLESVLDLLMMYGAYSTSRRLAVTRIFIRFLWFSFASALITFLYVKALQEQSKQNADSVIFRLYLIIVAIYAGLQIFLSILMRIPACHLLTNQCDRWSLIQFIKWMRQERYYVGRGMYERTTDFIKYMLFWLVILGGKFTFAYFLQIRPLVKPTKLIVTLPTIQYSWHDIVSKNNYNAFTVLSLWAPVICIYLLDIHVFYTVMYAILGFLLGARSRLGEIRSLEALHKLFEQFPGAFMDNLYVHSPNRHSSQFPDEVLERNKIDAAQFSPFWNEIIRNLREEDYITNLEKELLEMPKNSGTLSLVQWPLFLLASKIFLAKDIAVECRDSQDELWERISRDDYMQYAVQECYYTLKLILAAILDDEGKMWAERVYDEIQGRLGNRNIIVDFQLKKLPLVISRVTALMGILKEGETSETQKGAVKAVQDLYDVVHHDVFSLNLRGNFETWNTLTKARNEGRLFSKLKWPANPELKLQVKRLYSLLTIKDSASNVPKNLEARRRLQFFTNSLFMEMPVAKPVRQMLSFSVFTPYYSETVLYSREELEKKNEDGISVLFYLQKIFPDEWRNFLARINRNENEVDLDQFDENEILEVRFWASYRGQTLARTVRGMMYYRKALMLQTYLERMTSADVEAAVSTANSMDTQGFELSPEARAHADLKFTYVVTCQIYGKQKEEGKPQAADIAMLMQRNEALRIAFIDIVETLKDGNVRTEYYSKLVKADINGTDKEIYSIKLPGNPKLGEGKPENQNHAVVFTRGNAVQTIDMNQDNYFEEALKMRNLLEEFNHDHGIHPPTILGVREHVFTGSVSSLASFMSNQETSFVTLGQRVLATPLKVRMHYGHPDVFDRVFHITRGGISKSSRVINISEDIFAGFNTTLRQGNVTHHEYIQVGKGRDVGLNQIAIFEGKVAGGNGEQVLSRDVYRLGQLFDFFRMMSFYFTTVGFYFCTMLTVLTVYVYLYGKTYLALSGVGEALELTAKVNDNTALTAALNTQFLIQIGIFTAVPMILGFILEQGFLRAIVSFVTMQLQLCSVFFTFSLGTRTHYFGRTILHGGARYQATGRGFVVRHIKFAENYRLYARSHFVKGFEIVLLLVVYIAYGYNSGGAFAVILVTVSSWFMALSWLFAPYMFNPAGFEWQKTVEDFRDWTNWLLYRGGIGVKGEESWEAWWDEELAHIRTFGGRIAETILSLRFFIFQYGIVYKLKVQHYNTSLTVYGLSWAVLAGLIVLFKVFTFSQKISVNFQLLLRFIQGLSFLMAIAGLAVAIVLTDLTITDVLASILAFLPTGWGILSIAAAWKPLIKKIGLWKSVRSIALLYDATMGMLIFIPIALFSWFPFISTFQTRLMFNQAFSRGLEISLILAGNNPNTGI 1900
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 10362277 10381206 - Conep11aG0151000.1 Cone11ag1461 448713
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cone11ag1461 1900 Pfam 1,3-beta-glucan synthase component 1024 1712 IPR003440 GO:0000148(InterPro)|GO:0003843(InterPro)|GO:0006075(InterPro)|GO:0016020(InterPro)
Cone11ag1461 1900 Pfam 1,3-beta-glucan synthase subunit FKS1, domain-1 338 445 IPR026899 -
Cone11ag1461 1900 PANTHER LYST-INTERACTING PROTEIN LIP5 DOPAMINE RESPONSIVE PROTEIN DRG-1 36 1894 - GO:0005886(PANTHER)|GO:0046527(PANTHER)
Cone11ag1461 1900 Gene3D - 33 172 IPR023175 -
Cone11ag1461 1900 SMART FKS1_dom1_2 336 448 IPR026899 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cone11ag1461 Cone-Chr11:10362277 Cone13ag0207 Cone-Chr13:1293803 0 dispersed
Cone11ag1461 Cone-Chr11:10362277 Cone11ag1462 Cone-Chr11:10382581 0 tandem
Cone18ag0131 Cone-Chr18:694928 Cone11ag1461 Cone-Chr11:10362277 1.09E-48 transposed
Cone11ag1461 Cone-Chr11:10362277 Cone14ag1006 Cone-Chr14:8417814 0 wgd
Cone11ag1461 Cone-Chr11:10362277 Cone18ag0130 Cone-Chr18:680357 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cone11ag1461 K11000 - mdm:103425168 3157.85