Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cone11ag1473 ATGGAGAGACTTATGATGGGTGATGACTCATTGGGCGATAGTTCCGATCTAGAAGTTGATGATATAAGGATTGAAAACATTGCGGAAAAAGACGTTAGTGATGAAGAAATCGAACCGGAGGAATTGGAAAAGAGGATGTGGAAGGACCGGATCAAGCTTAAAAGGATCAAGGATAAACAGAAGCTCGAGGCCCAACAAGCAGCCGAGAAGCAACAGAAACCGAAACAGACTTCAGATCAGGCCCGAAGGAAGAAAATGTCTAGAGCCCAAGATGGGATTCTCAAGTACATGTTGAAGTTGATGGAAGTTTGCAAAGCCCGTGGGTTCGTTTATGGTATCATCCCAGAAAAGGGAAAGCCCGTTAGCGGCTCATCTGATAACATCCGGGCTTGGTGGAAAGAAAAGGTCAAGTTTGACAAGAACGGGCCTGCTGCTATAACCAAATATGAAGCGGAGTGTCTTGCAATGGGAGAGGCAGAGAATAACCGGAACAGGAATTCTCAGAACATTCTTCAAGACCTTCAAGATGCTACTCTTGGGTCTCTTTTGTCTTCTTTAATGCAACATTGCGACCCACCTCAAAGGAAATTTCCATTAGAGAAGGGGGTCCCACCGCCTTGGTGGCCGACTGGGAACGAAGATTGGTGGATCAAACTCGGGCTGCCGCACGGACAGGTCCCTCCGTATAAGAAGCCACACGATTTGAAGAAGATATGGAAAGTCGGAGTTTTAACAGCTGTGATTAAGCATATGTCGCCTGATATTGCCAAGATAAGAAGACACGTTAGACAATCAAAGTGCTTGCAAGATAAGATGACGGCAAAAGAGAGTGTGATTTGGTTAGGGGTTTTAAGCCGAGAAGAGTCTTTGATGAGACAACCTAGCTGTGATAATGATTCGTCTGGAGTAACTGAGACGCCTCCATGTGGTGGGAGGGGAAAGCAGGCAGCAGTTAGTAGTGATAGCGACTATGATGTTGACGGTGCTGAAGATGGGCTTGGCTCGGTTTCATCTAAAGATGATAGGAGAAGTCAATCTGTGGACGTGAACCCGCTCGTGCAAGAGAAAAAACAGGATGAAAAACAACCTAGGAGGAAACGACCTCGTACCAAGTCAAACGAAAACCCGGCCGGTGAAGTTGGTCAAGTTCCAGCCCCATCTCCTCTAAACCCATCCCTGGATATTAAGCACTTGGATGTTCAATTAGTTGGGCATAACGAGACGATTAATGGGTCGATGCCTCCTATGGAGGAAGATTGTGCAATTGAGACGCATTTAGCGGGAACAACAGATTTCAATAATTTATTGGGACTAGGTTCGGAGGATGTGATTTCTACTCAGAGCATGTTTGTTGATGGAAGGCCGTTACTGGGTCCTGCAATTCGAAATACAGAGATGCATCATGGGATTTCTTACAATGCTTATTATCATCATCATAATCCGTTGATGGATTACCAGTCTCAGATTGGTATGCAAGGGCAGCAACCTCAGATAAGAGCTGAAAATGGCTTACCACCTGGAAATGAGGTAGTGCTTAATGGAGGAGGAGAGTTGAATTATTACATAAATCATAGTGAACCGGATAGACCGGTTGATACCCAGTTTGGGTCTCCGATTAATAGCCTGTCATTAGACTTTGGAGGGTTTAGTGATAGCCCCTTCGATCTTGGAATTGATGGTACGGGTACCTTTGATGATCTTATGCTCGATGATGATTTGATGGAGTGTTTCGGATCCTAG 1740 45.23 MERLMMGDDSLGDSSDLEVDDIRIENIAEKDVSDEEIEPEELEKRMWKDRIKLKRIKDKQKLEAQQAAEKQQKPKQTSDQARRKKMSRAQDGILKYMLKLMEVCKARGFVYGIIPEKGKPVSGSSDNIRAWWKEKVKFDKNGPAAITKYEAECLAMGEAENNRNRNSQNILQDLQDATLGSLLSSLMQHCDPPQRKFPLEKGVPPPWWPTGNEDWWIKLGLPHGQVPPYKKPHDLKKIWKVGVLTAVIKHMSPDIAKIRRHVRQSKCLQDKMTAKESVIWLGVLSREESLMRQPSCDNDSSGVTETPPCGGRGKQAAVSSDSDYDVDGAEDGLGSVSSKDDRRSQSVDVNPLVQEKKQDEKQPRRKRPRTKSNENPAGEVGQVPAPSPLNPSLDIKHLDVQLVGHNETINGSMPPMEEDCAIETHLAGTTDFNNLLGLGSEDVISTQSMFVDGRPLLGPAIRNTEMHHGISYNAYYHHHNPLMDYQSQIGMQGQQPQIRAENGLPPGNEVVLNGGGELNYYINHSEPDRPVDTQFGSPINSLSLDFGGFSDSPFDLGIDGTGTFDDLMLDDDLMECFGS 579
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 10471156 10474022 + Conep11aG0152300.1 Cone11ag1473 448725
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cone11ag1473 579 MobiDBLite consensus disorder prediction 353 373 - -
Cone11ag1473 579 MobiDBLite consensus disorder prediction 290 392 - -
Cone11ag1473 579 Pfam Ethylene insensitive 3, DNA-binding domain 40 288 IPR047091 GO:0003700(InterPro)
Cone11ag1473 579 FunFam Ethylene insensitive 3-like 1 162 298 - -
Cone11ag1473 579 Gene3D - 160 299 IPR023278 GO:0003700(InterPro)|GO:0005634(InterPro)
Cone11ag1473 579 Gene3D - 75 151 IPR023278 GO:0003700(InterPro)|GO:0005634(InterPro)
Cone11ag1473 579 FunFam Ethylene insensitive 3-like 1 75 153 - -
Cone11ag1473 579 MobiDBLite consensus disorder prediction 60 86 - -
Cone11ag1473 579 SUPERFAMILY DNA-binding domain of EIN3-like 169 292 IPR023278 GO:0003700(InterPro)|GO:0005634(InterPro)
Cone11ag1473 579 PANTHER ETHYLENE INSENSITIVE 3-LIKE 2 PROTEIN 15 469 IPR006957 GO:0003677(PANTHER)|GO:0003700(PANTHER)|GO:0003700(InterPro)|GO:0005634(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cone11ag1473 Cone-Chr11:10471156 Cone5ag0446 Cone-Chr5:1893514 7.50E-114 dispersed
Cone11ag1473 Cone-Chr11:10471156 Cone18ag0117 Cone-Chr18:603819 6.68e-314 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
44395 PF01433 Peptidase_M1 3.10E-41 CL0126 Cone TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cone11ag1473 K14514 - csv:101210347 696.041