Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cone11ag1483 ATGGATCCACTGTCTTCGCCGAAGCTGGACCTGAACAATCTTAGAGCTCTTAAAATCCTAGGAAAAGGAGCTATGGGCACAGTCTTCCTCGTCCACGATCGGCCAGCTGACCCCTCTGCCCGTTCCCCATTCGCCATTAAAGTCATCGACAAGGACTCCTTCCATACTAGACTCGACGCCCAACGCCGAGCTCGCTGGGAAATCCAGGTCCTGAACCGACTTTCCGTCCCCAAACCGCACCCGTTTCTCCCCTCCCTTATCGGTTCGTTCGAATCCGATGAGCTCTTAGGTTGGGCCGTACCTTACTGTCCTGGCGGCGACCTCAACGTTCTCCGTTACAGCCAAACGGACCGCGTTTACTCCCCGGCGGTCATTAGGTTTTATCTAGCTCAGCTTGTCTGCGCTCTCGACTACCTTCATACCATGGGCATCGCTTACCGCGACTTAAAGCCTGAAAACGTTTTGATTCAACAATCTGGCCACGTGACACTCACGGACTTCGACCTTTCCCGTAATTTAACGCCTAAATCCGCCACAGTCGCTATAACCGACGAAGAAGACCCACCGCCGGAGATTCCTCGACGACACAAGCGAAACCTGACTCGGTGGATATCAACCGTCGGTCCGGAGAAGAACAACAAAAAGAGCTTGAAGAAAGCGAAGTCGGCACGAGTCAGCCCGGTGAGTCGCCGGATACCGAGTTTCTCCAACGGCGAACGTTCCTTTTCATTTGTCGGAACAGAAGAGTACGTCTCGCCAGAAGTCGTGCGCGGCGACGGACACGAATTCGCCGTCGATTGGTGGGCCTTGGGAATATTAACGTACGAGATGCTCTATGGAACGACGCCTTTTAAAGGCAAGAACCGGAAGGAAACGTTTCGAAACGTTTTGGTAAAGGCGCCAGAATTCGTTGGCCAACGCACCGCTTTAACGGATTTGATCGGACGGTTACTAGAAAAGGATCCCACAAGAAGATTAGGATATCTTAGAGGCGCGAATGAGATCAAGGAGCATGATTTCTTCAGGGGAGTAAAGTGGGACCAACTGACGGAAGTCTTACGCCCACCCTTTATTCCGTCAATGGAGGAGGAGGAGGATTTAACCGCCGGTGGAATTGACATTAAAGAGTACTTCCAGCGCTTGAGATCACCGCCGTCAATTCCTCCTTCTCCGTCAGCCGAAGGGGAGAGGGACGTGTGGGTGACAGAATTCTGA 1215 52.59 MDPLSSPKLDLNNLRALKILGKGAMGTVFLVHDRPADPSARSPFAIKVIDKDSFHTRLDAQRRARWEIQVLNRLSVPKPHPFLPSLIGSFESDELLGWAVPYCPGGDLNVLRYSQTDRVYSPAVIRFYLAQLVCALDYLHTMGIAYRDLKPENVLIQQSGHVTLTDFDLSRNLTPKSATVAITDEEDPPPEIPRRHKRNLTRWISTVGPEKNNKKSLKKAKSARVSPVSRRIPSFSNGERSFSFVGTEEYVSPEVVRGDGHEFAVDWWALGILTYEMLYGTTPFKGKNRKETFRNVLVKAPEFVGQRTALTDLIGRLLEKDPTRRLGYLRGANEIKEHDFFRGVKWDQLTEVLRPPFIPSMEEEEDLTAGGIDIKEYFQRLRSPPSIPPSPSAEGERDVWVTEF 404
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 10511741 10512955 - Conep11aG0153300.1 Cone11ag1483 448735
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cone11ag1483 404 SUPERFAMILY Protein kinase-like (PK-like) 11 383 IPR011009 -
Cone11ag1483 404 Pfam Protein kinase domain 17 186 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cone11ag1483 404 Pfam Protein kinase domain 238 341 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cone11ag1483 404 FunFam Serine/threonine-protein kinase UCNL 14 106 - -
Cone11ag1483 404 ProSitePatterns Serine/Threonine protein kinases active-site signature. 144 156 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Cone11ag1483 404 FunFam Serine/threonine-protein kinase OXI1 107 175 - -
Cone11ag1483 404 SMART serkin_6 14 341 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cone11ag1483 404 ProSiteProfiles AGC-kinase C-terminal domain profile. 342 404 IPR000961 GO:0004674(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cone11ag1483 404 MobiDBLite consensus disorder prediction 383 404 - -
Cone11ag1483 404 Gene3D Transferase(Phosphotransferase) domain 1 237 360 - -
Cone11ag1483 404 ProSiteProfiles Protein kinase domain profile. 14 341 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cone11ag1483 404 ProSitePatterns Protein kinases ATP-binding region signature. 20 47 IPR017441 GO:0005524(InterPro)
Cone11ag1483 404 Gene3D Phosphorylase Kinase; domain 1 14 106 - -
Cone11ag1483 404 FunFam Serine/threonine-protein kinase OXI1 239 360 - -
Cone11ag1483 404 PANTHER FLIPPASE KINASE 1-RELATED 8 362 - GO:0004674(PANTHER)|GO:0005634(PANTHER)|GO:0005737(PANTHER)|GO:0005886(PANTHER)|GO:0006468(PANTHER)
Cone11ag1483 404 Gene3D Transferase(Phosphotransferase) domain 1 107 180 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cone10ag0589 Cone-Chr10:2760059 Cone11ag1483 Cone-Chr11:10511741 3.80E-89 dispersed
Cone11ag1483 Cone-Chr11:10511741 Cone3ag0616 Cone-Chr3:3050306 1.05E-95 dispersed
Cone11ag1483 Cone-Chr11:10511741 Cone14ag0992 Cone-Chr14:8212095 2.40E-66 wgd
Cone11ag1483 Cone-Chr11:10511741 Cone18ag0111 Cone-Chr18:581489 2.24E-281 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
81920 None None None None Cone PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cone11ag1483 - - - 0.0