Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cone11ag1489 ATGGCCTCCGTCGTGCTCACCACCTCCTACCTTCCTTCGCTTCGATCTCGCTCTCAGAATTCCGCTCCGAAAGTACACGCTCGCTTCTCTCCTCGAGTGAAGGTCTCTGAAATTTCCGTTCTCCGAAGCGGATTTGGAACTGGGATTCCTATTAGTCAATCTCGTTTGAACAGTTCTGAGATAGCTGGATCAGTTAGCGGATTCAGTGTAACTCGTAGAAATCTCAGTTTTGGCACGATTCGAGCGGCTGCAGCTGCTTCGTCTTCTCCGGCGCCGGTAGCTCCGGCACCTCAGCCATGGCAAGGAGCGGCGATGAAGCCACTACTTGCGTCTATTGCGACAGGGGTTATTTTATGGTTTGTTCCGGTACCTGCTGGAGTGACTAAAAATGCGTGGCAATTGCTGGCAATTTTCCTCGCTACAATCGTCGGGATCATTACTCAGCCTTTACCTCTTGGTGCTGTGGCCTTGATGGGACTCGGAGCCTCTGTCCTCACGAAAACCCTAACCTTTTCAGCTGCTTTCTCTGCCTTTGGAGATCCGATCCCGTGGCTCATCGCTCTTGCCTTCTTCTTCGCCCGAGGCTTCATCAAGACTGGTCTTGGTAACAGAATTGCTTATCAATTCGTCTCTTTGTTTGGTAGCTCGTCGTTAGGATTAGGATACAGTTTGGTGTTCAGTGAGGCCTTGTTGGCTCCAGCTATTCCATCAGTGTCGGCAAGAGCTGGAGGGATTTTCCTTCCGCTTGTGAAATCACTCTGCGTTGCATGCGGTAGTAATGTTGGTGACGGAACAGAGCATAAGCTAGGATCGTGGTTGATGCTTACTTGCTTTCAAACTTCGGTGATTTCATCGGCAATGTTCTTGACAGCTATGGCGGCAAATCCTTTGAGTGCAAATTTAACGTTTAATACAATTAAGCAGACAATTGGCTGGACAGATTGGGCTAAGGCAGCCTTTGTTCCTGGTCTGGTGTCATTAATCGTGGTGCCGTTTATTTTGTATGTGATTTATCCGCCTACAGTGAAGAGCAGCCCAGACGCACCCAAGCTGGCAAGGGAGAAGTTGGCAAAGATGGGGCCAATGACCAAGAGTGAGATAATAATGGCTGGGACTCTTCTCCTAACGGTGGGACTCTGGATTTTTGGTGGGGCGATCAATGTGGATGCTGTTACTGCTGCAATTTTGGGATTATCTGTCCTTCTTGTGTCGGGGGTTGTGACTTGGAAGGAGTGCTTGAGTGAAGCAGTTGCCTGGGACACCCTAACATGGTTTGCTGCTCTAATTGCAATGGCTGGGTATCTCAACAAATACGGCCTCATCTCCTGGTTCAGTCAAACTGTAGTCAAGTTTGTTGGTGGACTGGGACTCTCATGGCAGGCTTCTTTTGGAATTCTAGTCATCCTTTATTTCTACTCTCACTACTTCTTTGCAAGTGGGGCCGCACACATCGGAGCGATGTTCACAGCCTTCTTGTCAGTTGCTAGCGCATTAGGTACCCCACCATATTTTGCAGCAATGGTTCTTTCCTTCCTCTCCAACCTCATGGGCGGTCTGACCCATTATGGCATAGGGTCAGCCCCTGTCTTCTATGGTGCAAACTACGTCCCTCTCGGTAAATGGTGGGGCTATGGATTCCTTATCTCCGTTGTCAATTTGATTATTTGGCTCGGTGTTGGAAGTGTCTGGTGGAAGGCAGTCGGATTGTGGTGA 1713 49.27 MASVVLTTSYLPSLRSRSQNSAPKVHARFSPRVKVSEISVLRSGFGTGIPISQSRLNSSEIAGSVSGFSVTRRNLSFGTIRAAAAASSSPAPVAPAPQPWQGAAMKPLLASIATGVILWFVPVPAGVTKNAWQLLAIFLATIVGIITQPLPLGAVALMGLGASVLTKTLTFSAAFSAFGDPIPWLIALAFFFARGFIKTGLGNRIAYQFVSLFGSSSLGLGYSLVFSEALLAPAIPSVSARAGGIFLPLVKSLCVACGSNVGDGTEHKLGSWLMLTCFQTSVISSAMFLTAMAANPLSANLTFNTIKQTIGWTDWAKAAFVPGLVSLIVVPFILYVIYPPTVKSSPDAPKLAREKLAKMGPMTKSEIIMAGTLLLTVGLWIFGGAINVDAVTAAILGLSVLLVSGVVTWKECLSEAVAWDTLTWFAALIAMAGYLNKYGLISWFSQTVVKFVGGLGLSWQASFGILVILYFYSHYFFASGAAHIGAMFTAFLSVASALGTPPYFAAMVLSFLSNLMGGLTHYGIGSAPVFYGANYVPLGKWWGYGFLISVVNLIIWLGVGSVWWKAVGLW 570
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 10543330 10547011 + Conep11aG0153900.1 Cone11ag1489 448741
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cone11ag1489 570 CDD ArsB_NhaD_permease 142 564 - -
Cone11ag1489 570 Pfam Sodium:sulfate symporter transmembrane region 107 570 IPR001898 GO:0016020(InterPro)|GO:0022857(InterPro)|GO:0055085(InterPro)
Cone11ag1489 570 PANTHER DICARBOXYLATE TRANSPORTER 2.1, CHLOROPLASTIC 27 570 IPR030676 GO:0005215(PANTHER)
Cone11ag1489 570 NCBIfam DASS family sodium-coupled anion symporter 122 564 IPR001898 GO:0016020(InterPro)|GO:0022857(InterPro)|GO:0055085(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cone11ag1489 Cone-Chr11:10543330 Cone3ag1088 Cone-Chr3:29508565 8.90E-164 dispersed
Cone11ag1489 Cone-Chr11:10543330 Cone18ag0105 Cone-Chr18:543277 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cone11ag1489 - - - 0.0