Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cone12ag0018 ATGGCGTCGAAACCGGACGGGATGATCATCTGTTTCTCACCAACAATGATAACAACAGACGGTATATGGCAGGGTGATAATCCCTTAGACTATTCCCTCCCTCTCTTCATCTTACAACTGACCATCATTGTTGCGTTGACTCGCCTCCTCGTCTTCCTCCTCAAACCCCTTCACCAACCTCGTGTTATTTCCGAAATCCTGGGTGGAGTTATTTTGGGCCCTTCAATACTGGGAAGGAGCTCTAGATTTGCCAACATAGTATTTCCTCTAAGAAGCGTAATGGTGCTCGAGACGATGGCAAATGTCGGTCTCCTTTTCTTTCTCTTCTTAGTCGGTGTCGAGATGGACCTTGCGGTTGTTCGCCGCACCGGGAAGAAAGCCATGGCCATTTCCCTTTCCGGAATGGTCATACCTTTCATTATAGGAGTCTGCTTCTCCTTCCTCATACACAGAAAAAACAGCACCGTGAGCCAAGGAAACTTCGTGCTCTTCTTCTGCGTCGCTCTCTCTGTCACGGCATTTCCTGTACTTTCCCGGATTCTCGCCGAGCTCAAACTCCTGAATACCGAGATTGGAAGAGTCTCATTATCAGCTGCACTGTTCAATGACATGTGTGCTTGGGTTTTCTTAGCCTTAGCCATTGCCTTATCAGAGAACCAAAAGCATTCCTTGGCTTCCTTATGGGTGATTTTATCAAGTGCAGCCTTTGTCACATTCTGCATATTCGTGGTTAGGCCAGCTGTTTCATGGTTAATTCAGCGAAATCCGGAAGGAGAAAGCTTTAGCGAGCTCCAATTGTATATGATCCTTACAGGGGTTATGATTGCGGGATTCATTACTGATGCCATGGGTACGCATTCGGTTTTTGGCGCATTCATTTTCGGCCTTGTTATTCCAAACGGACCTCTTGGAGTTACTCTTATCGAAAAGCTTGAAGATTTTGTTTCGGGTCTTCTTCTCCCTCTCTTCTTTGCAATAAGTGGCCTCAAAACGGATATAGCTTCGATCGAAGGAGCCGGGACATGGTCTGCTCTAATCCTTGTCATTGTTCTAGCTTTCGCTGGAAAAGTCGGTGGGACCATTCTTGCTACCCGCTTTTACCAAATGCCGTACCGTGAAGGAATGACTCTTGGTTTGCTTATGAACACGAAAGGTCTTGTCGAAATCATCCTCATCAACATCGGAAAAGACCACAATGTCCTTGATGATCAATCGTTCGCCATACTCGTGTTTGTCGCTGCTGCCATGACTGCACTCATCAGCCCGTTTGTAACCATTATTTACAAACCGCCAAAGAGACGTGCTTCTTACAAGAAGAGAACCATTCAATCATCCAAATCGGATTCTGAGTTTAGAGTCTTAGTATGCATTCACACCCCTCGAAACGTCCCGACGATAATCAACCTCCTCGATGCTTCATACCCGACAAAGAAATCCCCAATCTGCATTTACGTCTTGCAATTGGTCGAACTCACCAGCCGAGCTTCCGCAATGCTCATAGTTCACAACACGAGAAAATCCAGCCGCCCGGTCCTGAACAGAACAGAAGCTCAGTCGGACCACATCATTAACGCGTTCCAAAACTACGAGCAATATGCTGGTTTCGTCTCGGTCCAACCCCTCACAGCCATATCTCCCTACTCCACAATGCATGATGACATAAGCAATTTGGCGGAGGACAAACGCGTTGGCCTGATCATCATCCCGTTCCACAAGCAACAAACTGTAGATGGCGGAATGGAAGCCACGAACCCAGCCTTCCGAACCATGAACCGAAACCTACTTGTTAATGCTCCTTGCTCGGTTGGAATCTTAGTCGACCGAGGCCTCAGTGGGTCCAACCGATTCGCGGCAAACCAACTATCACACCATGTGGTGGTGGTGTTCTTTGGAGGGCCGGATGACCGGGAAGCCTTATCATACGGGTGGCGCATGGCAGAACATCCCGGAATAAACCTAACCGTCATGAGGCTTATACCAAGGCAAGACATACCATCAGATCATCAAATAGCCTCTGATTTAAAAAACTCCAGTAAACTCACGTTAACCTTAGAAACCGATACTAAGAGAGAAAGACAACTCGATGAAGAGTACATAAATGAATTCCGAACAAAAAATTCGGATGATGAGTCGATCGCCTACATCGAACAAGTGGTAAATAACGGGGAAGAGACGGTGGCGGCGTTGAGATCGATCGATAATACTGCTCATGATTTGTTCATAGTAGGGAGAGGTAAAGGGATGATATCGCCACTTCAGGCCGGTATGAATGATTGGAGCGAGTGTCCGGAGCTTGGTGCGATCGGTGACTTGCTGGCATCAACGGATTTTACAGCAAATTTTTCGGTGTTAGTTGTACAGCAGTATAATGGGAATGAGGAGATTGAGGAGGGGAATTATGTAGATGAGCAGCAACTGGGGAATGTAGTAACACCAATGATTCAGTGGCCTAAAGGCACACCAAGTACGGATCAACAGTATGTGTTTAATGCAAGTCCACAGTTGTGA 2508 46.81 MASKPDGMIICFSPTMITTDGIWQGDNPLDYSLPLFILQLTIIVALTRLLVFLLKPLHQPRVISEILGGVILGPSILGRSSRFANIVFPLRSVMVLETMANVGLLFFLFLVGVEMDLAVVRRTGKKAMAISLSGMVIPFIIGVCFSFLIHRKNSTVSQGNFVLFFCVALSVTAFPVLSRILAELKLLNTEIGRVSLSAALFNDMCAWVFLALAIALSENQKHSLASLWVILSSAAFVTFCIFVVRPAVSWLIQRNPEGESFSELQLYMILTGVMIAGFITDAMGTHSVFGAFIFGLVIPNGPLGVTLIEKLEDFVSGLLLPLFFAISGLKTDIASIEGAGTWSALILVIVLAFAGKVGGTILATRFYQMPYREGMTLGLLMNTKGLVEIILINIGKDHNVLDDQSFAILVFVAAAMTALISPFVTIIYKPPKRRASYKKRTIQSSKSDSEFRVLVCIHTPRNVPTIINLLDASYPTKKSPICIYVLQLVELTSRASAMLIVHNTRKSSRPVLNRTEAQSDHIINAFQNYEQYAGFVSVQPLTAISPYSTMHDDISNLAEDKRVGLIIIPFHKQQTVDGGMEATNPAFRTMNRNLLVNAPCSVGILVDRGLSGSNRFAANQLSHHVVVVFFGGPDDREALSYGWRMAEHPGINLTVMRLIPRQDIPSDHQIASDLKNSSKLTLTLETDTKRERQLDEEYINEFRTKNSDDESIAYIEQVVNNGEETVAALRSIDNTAHDLFIVGRGKGMISPLQAGMNDWSECPELGAIGDLLASTDFTANFSVLVVQQYNGNEEIEEGNYVDEQQLGNVVTPMIQWPKGTPSTDQQYVFNASPQL 835
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
12 165910 168532 + Conep12aG0001800.1 Cone12ag0018 448862
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cone12ag0018 835 PANTHER CATION/H + ANTIPORTER 10 793 IPR050794 GO:0006885(PANTHER)|GO:0012505(PANTHER)|GO:0015672(PANTHER)
Cone12ag0018 835 FunFam Cation/H(+) antiporter 15 35 435 - -
Cone12ag0018 835 Gene3D - 35 436 IPR038770 -
Cone12ag0018 835 Pfam Sodium/hydrogen exchanger family 45 424 IPR006153 GO:0006812(InterPro)|GO:0015297(InterPro)|GO:0016020(InterPro)|GO:0055085(InterPro)|GO:1902600(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cone12ag0018 Cone-Chr12:165910 Cone9ag0826 Cone-Chr9:4014052 6.97E-244 dispersed
Cone12ag0018 Cone-Chr12:165910 Cone6ag1271 Cone-Chr6:10152369 0 wgd
Cone12ag0018 Cone-Chr12:165910 Cone8ag0012 Cone-Chr8:121980 5.58E-120 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cone12ag0018 K26731 - rcu:8281216 1157.13