Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cone12ag0020 | ATGGCAACATCAAACGCCTATAATGTTTTGTCATGCAACTATGCTGTTGCAGGTGCCGGGCCCTCATCGGAGCTTAACTCAAAGCTCGTTCCAGTCTCTCCGGCACTGATCCCTGCTTCTCGGAAATCGTGGGCAATCAGGGCTCAGCAACAAGCTAAAGTTTCTGAAGCACAAGAATCAAAGGGAAGCGAAGGAAGAAGGGGTGCACTTGTTTTCCTAGCAGCCAGCTTTTTCGCTGCTACTTCTGCCTCCTCGTCCTCTGCAAATGCTGGCATCATTGAAGAATACCTCGAAAAGAGCAAAACCAACAAGGATTTGAATGACAAGAAAAGGTTGGCAACAAGTGGAGCAAATTTTGCAAGAGCATACACTGTTCAGTTTGGCACTTGCAAATTCCCTGAGAACTTCACTGGCTGCCAAGATCTTGCCAAGACAAAGAAAGTGCCATTCATCAGTGATGATTTGCAGCTGGAGTGTGAGGGTAAGGACAAGTACAAGTGTGGTTCCAATGTCTTCTGGAAATGGTGA | 528 | 46.78 | MATSNAYNVLSCNYAVAGAGPSSELNSKLVPVSPALIPASRKSWAIRAQQQAKVSEAQESKGSEGRRGALVFLAASFFAATSASSSSANAGIIEEYLEKSKTNKDLNDKKRLATSGANFARAYTVQFGTCKFPENFTGCQDLAKTKKVPFISDDLQLECEGKDKYKCGSNVFWKW | 175 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
12 | 174101 | 175445 | - | Conep12aG0002000.1 | Cone12ag0020 | 448864 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cone12ag0020 | 175 | PANTHER | PHOTOSYSTEM I REACTION CENTER SUBUNIT N, CHLOROPLASTIC | 1 | 175 | IPR008796 | GO:0009522(InterPro)|GO:0015979(InterPro)|GO:0030093(PANTHER) | |
Cone12ag0020 | 175 | FunFam | Photosystem I reaction center subunit N | 91 | 175 | - | - | |
Cone12ag0020 | 175 | Pfam | Photosystem I reaction centre subunit N (PSAN or PSI-N) | 45 | 175 | IPR008796 | GO:0009522(InterPro)|GO:0015979(InterPro) | |
Cone12ag0020 | 175 | Gene3D | - | 91 | 175 | IPR044907 | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cone12ag0020 | Cone-Chr12:174101 | Cone6ag1277 | Cone-Chr6:10198074 | 1.35E-75 | wgd | |
Cone12ag0020 | Cone-Chr12:174101 | Cone8ag0016 | Cone-Chr8:135147 | 2.57E-106 | wgd |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cone12ag0020 | K02701 | - | cit:102611607 | 225.713 |