Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cone12ag0023 | ATGCCTGCTTGGTGGGGGAAAAAGTCGAGTAAGAACAAAGATCAAAGCCCACGAAGTAGCTCCACCAGCTTATCAAAATCAGCGCCCCTCTTCAACAAGCTCGGAGATAAGAAGAAATCGAGTAACGATGAAAAGCCCAAGAGTTTTGACGAGGTCTCCGCCGTGATTTTCTCCAGAAGCTCACCACGGTCGAGCAAGGATTATACTTCTCCACGAGCTGGAGCTGGCGGCTCTTCTGGGTTTTCTGGTTTCGATTCAGATTCGGGCGAGAGGACGTGTCATCCTCTTCCTCGCCCACAGTGCTTTACTATTGATCATCATGCGGTTGGGATTGGATCTGGGTCGGGTTCGGTTTCTAGTGTCAGCTCAACTGGGTCGTCCGATGATCATCCGATCTCTCAGGATCATGGCCAATTAAATGCTCACAAGGGTCTTGGTGATTCCAAAATAGACCTGAGGTCGAGAAGCCCAGGCCCAGGGTCTAGGGGGCCCACAAGCCCGACATCACCTCTCCACCCACGGTTTTGTGGATTGAATCTGATTGAGTCTCCAGCGGGAAAGATAGACGATGCAAAGAGTCAATGTCATAGGCTACCACTTCCACCAGGTTCTCCTACAAGCCCTTCTGCCTTGGCCAGCTCAAGAACTAATGGTGTGACAGAAAACTCAACAACTTCCACACAACCAAAATGGAAGAAAGGAAGGCTACTTGGAAGGGGCACATTCGGGCATGTTTACCTTGGTTTTAACAGTGTTAATGGGCAAATGTGTGCAATCAAAGAAGTCAGGCTTGTAAGTGATGACCGGACATCTAAAGAATGTCTCAAGCAACTGAATCAGGAGATAAATTTGCTCAGTCAGCTTTCACATCCTAACATTGTTAGATATTATGGAAGCGAGATGGTTGATGAGGCGCTGTCGGTCTATTTAGAATATGTGTCAGGTGGTTCAATCCACAAATTACTTCAAGAGTATGGCCCTTTTAAAGAACCTGTTATCCAGAACTACACACGGCAGATTATTTCTGGGCTTGCTTATCTTCATGGACGGAATACTGTGCACAGGGATATCAAGGGAGCCAACATATTGGTAGATCCTCACGGCGAGATCAAGCTGGCAGACTTTGGGATGGCTAAACATATAACAAATTGCTGTTCGATGCTTTCTTTCAAAGGAAGTCCTTATTGGATGGCACCCGAGGTTGTAATGAATACAAATGGCTATAGTCTTGCTGTTGATATATGGAGCTTGGGTTGTACAATCCTTGAAATGGCAACATCAAAACCACCTTGGAGCAAATATGAAGGGGTGGCTGCCATATTCAAAATCGGGAACAGCAAAGATATTCCCGAAATTCCCAATCATCTTTCTAGCGATGCAAAGAGTTTTATCAAACTATGTTTGCAACGGGACCCATCAGCTCGTCCAACAGCCTCACAATTGCTAGACCACCCTTTTATTCGAGACCAAATGACTCCTACTAATAAAGCTGCTAGTGTCAATGTGACTACCATGGATGCCTTTATCTTCAATTGTGAAGGAATTCGGACCACGCCAATGTTGGATCATCATCCCACCAGGAAAAGTATAAGCTCGTGTGATAATAGAGATTTTGAGTTGAACCCAGTACTAAGGACTTCAAGAGCAATGCGGGGCCTGAGTGAGAATGCAAGAATGATCACATCTCTACCTGTATCTCCATGTTCAAGTCCATTAAGACAATACAAAAGCACTTATCTCTCGCCCCCACACCCATCTTTTCCGACAATGGCGCAAAGCAATTACAATGTAAACTACTCATCACATGCGGTTAGACAATTTGCCACTCTCGATCCTTGGCAAGAATCGTCTCTTTTCAGAGTCCAGACTCCTGGTGGGTCCCCACGAACAAGACTAATTTGA | 1902 | 45.69 | MPAWWGKKSSKNKDQSPRSSSTSLSKSAPLFNKLGDKKKSSNDEKPKSFDEVSAVIFSRSSPRSSKDYTSPRAGAGGSSGFSGFDSDSGERTCHPLPRPQCFTIDHHAVGIGSGSGSVSSVSSTGSSDDHPISQDHGQLNAHKGLGDSKIDLRSRSPGPGSRGPTSPTSPLHPRFCGLNLIESPAGKIDDAKSQCHRLPLPPGSPTSPSALASSRTNGVTENSTTSTQPKWKKGRLLGRGTFGHVYLGFNSVNGQMCAIKEVRLVSDDRTSKECLKQLNQEINLLSQLSHPNIVRYYGSEMVDEALSVYLEYVSGGSIHKLLQEYGPFKEPVIQNYTRQIISGLAYLHGRNTVHRDIKGANILVDPHGEIKLADFGMAKHITNCCSMLSFKGSPYWMAPEVVMNTNGYSLAVDIWSLGCTILEMATSKPPWSKYEGVAAIFKIGNSKDIPEIPNHLSSDAKSFIKLCLQRDPSARPTASQLLDHPFIRDQMTPTNKAASVNVTTMDAFIFNCEGIRTTPMLDHHPTRKSISSCDNRDFELNPVLRTSRAMRGLSENARMITSLPVSPCSSPLRQYKSTYLSPPHPSFPTMAQSNYNVNYSSHAVRQFATLDPWQESSLFRVQTPGGSPRTRLI | 633 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
12 | 182913 | 186802 | - | Conep12aG0002300.1 | Cone12ag0023 | 448867 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cone12ag0023 | 633 | PANTHER | MAP KINASE KINASE KINASE SSK2-RELATED-RELATED | 29 | 493 | IPR050538 | - | |
Cone12ag0023 | 633 | MobiDBLite | consensus disorder prediction | 113 | 134 | - | - | |
Cone12ag0023 | 633 | SMART | serkin_6 | 231 | 487 | IPR000719 | GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro) | |
Cone12ag0023 | 633 | MobiDBLite | consensus disorder prediction | 207 | 230 | - | - | |
Cone12ag0023 | 633 | MobiDBLite | consensus disorder prediction | 15 | 29 | - | - | |
Cone12ag0023 | 633 | ProSiteProfiles | Protein kinase domain profile. | 231 | 487 | IPR000719 | GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro) | |
Cone12ag0023 | 633 | SUPERFAMILY | Protein kinase-like (PK-like) | 230 | 488 | IPR011009 | - | |
Cone12ag0023 | 633 | Pfam | Protein kinase domain | 232 | 487 | IPR000719 | GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro) | |
Cone12ag0023 | 633 | MobiDBLite | consensus disorder prediction | 32 | 50 | - | - | |
Cone12ag0023 | 633 | ProSitePatterns | Protein kinases ATP-binding region signature. | 237 | 260 | IPR017441 | GO:0005524(InterPro) | |
Cone12ag0023 | 633 | MobiDBLite | consensus disorder prediction | 1 | 98 | - | - | |
Cone12ag0023 | 633 | MobiDBLite | consensus disorder prediction | 192 | 230 | - | - | |
Cone12ag0023 | 633 | FunFam | Mitogen-activated protein kinase kinase kinase | 229 | 511 | - | - | |
Cone12ag0023 | 633 | CDD | STKc_MEKK1_plant | 230 | 487 | - | - | |
Cone12ag0023 | 633 | Gene3D | Transferase(Phosphotransferase) domain 1 | 227 | 510 | - | - | |
Cone12ag0023 | 633 | MobiDBLite | consensus disorder prediction | 113 | 176 | - | - | |
Cone12ag0023 | 633 | MobiDBLite | consensus disorder prediction | 54 | 86 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cone12ag0023 | Cone-Chr12:182913 | Cone1ag1174 | Cone-Chr1:55782217 | 4.89E-139 | dispersed | |
Cone12ag0023 | Cone-Chr12:182913 | Cone4ag1555 | Cone-Chr4:11959759 | 1.46E-93 | wgd | |
Cone12ag0023 | Cone-Chr12:182913 | Cone6ag1281 | Cone-Chr6:10240385 | 2.96E-239 | wgd | |
Cone12ag0023 | Cone-Chr12:182913 | Cone7ag1397 | Cone-Chr7:10015837 | 7.09E-94 | wgd | |
Cone12ag0023 | Cone-Chr12:182913 | Cone8ag0019 | Cone-Chr8:140232 | 0 | wgd | |
Cone12ag0023 | Cone-Chr12:182913 | Cone9ag1239 | Cone-Chr9:9076150 | 8.27E-235 | wgd |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
81927 | PF01061 | ABC2_membrane | 5.70E-44 | CL0181 | Cone | PK |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cone12ag0023 | K04421 | - | cit:102607672 | 791.186 |