Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cone12ag0152 ATGGATCAAAGCACACTACTGCTCTACATCTCTCTCTCACTACTCTCTCTCCTCCTAGCTTTCAAACTTTTCCTTCGATCGAAAAACCGCCGCAGACTCCACCTCCCCCCAAGCCCACCTTCATATCCAATCATCGGCCATTTGCATCTCATCAAACATCCGGTTTTCCGAGCATTGCACAAACTGTCAGAGAAATACGGTCCGGTTATCTCTCTCCGGTTCGGGTCCCGCCTAGTCGTTGTTGTATCGTCCCCGTCGGCCGTTCAAGAATGTTTCACTAAAAATGACATCATTCTTGCCAACAGACCTGGATTGACTGCAACCAAGAAAATAGCTTACAACGGCACAACCGTCTCTGCCGCCCCGTATGGCGAGCACTGGAGGAATCTCCGCCGTCTCTGTGCCATTGAGATCTTCTCGTCAAGCCGGCTCAACCAATTTTCAGCAATAAGAAGAGACGAAGTGAAACGTTTACTAGAAAAATTGTCCAAGAATTCGTTCTCTAAATTCGCCAAAGTAGAGATGCAGTCTAAACTGTCAGAACTTTCATACAACATTATGATGAGAGAGATTGCAGGGAAGAGATACTACGGGGACGATGTGTCGGACATGGAGGAGGCAGAGCAGTTTAGGGATCTAATGAGACAAATTGTGTCGTTTGGTGGGGCGTCGCGTCCGGAAGACTACTTGCCCATTTTAAGATGGATCGACCCGAAAGGAAATCAAAAGAAAATAGCAGTGCTTTCCAAGAAATCAGACGATTTCTTGCAGGGCTTAATTAATGATCAACGAAACAAAAGTAAGGAAATGGAGATGAGGACTACTATGATCGACCATCTACTTTCTCTGCAGGAGACTGAGCCAGAGTACTACAGCGATCAAATAATCAAAGGACTTATTCTGATAATGCTGGTTGCAGGGACGGATACTTCAGCCGTGACACTAGAATGGGCCCTTGCCCATTTGCTCAACAACCCGGAAGTGTTAAAGAAAGCTCGAGCCGAGCTAGACTCTCAAACAGGACAGGACCGGCTTGTCGAAGAATCCGACATGTCGAAATTACCCTACCTAAGAGCAATAATATTTGAGACACTCCGGTTGACCCCTGCCGCACCTCTACTAGTGCCACATTATTCATCCGAAGATTGCACAATAGAAGGATATGACGTGCCGCGTAACACTATCGTACTGATCAATGCATGGGCCATTCATAGAGACCCTAATCACTGGGAAGACGCCACAGCTTTTAAGCCGGAGAGATTTGAAAACGGAGAGGCAGTCGAGTCGCATAAGCTTTTACCGTTCGGGTTGGGAAGGAGAGCTTGTCCGGGTGCTAGCCATGCTCAGCGTGTAGTGAGCTTGGCTTTGGCTTCATTGATTCAATGCTTTGAGTGGGAAAGAGAAGACGATGAGGAAGAAATTGATATGGCGGAAGCGATGGGGACTGTAATGCATAAGGTTGTGCCTTTACAGGCTTTGTGCAAGGCTCGTCCGATTTTGAATAAGGTTATTGCTGAATGA 1521 46.94 MDQSTLLLYISLSLLSLLLAFKLFLRSKNRRRLHLPPSPPSYPIIGHLHLIKHPVFRALHKLSEKYGPVISLRFGSRLVVVVSSPSAVQECFTKNDIILANRPGLTATKKIAYNGTTVSAAPYGEHWRNLRRLCAIEIFSSSRLNQFSAIRRDEVKRLLEKLSKNSFSKFAKVEMQSKLSELSYNIMMREIAGKRYYGDDVSDMEEAEQFRDLMRQIVSFGGASRPEDYLPILRWIDPKGNQKKIAVLSKKSDDFLQGLINDQRNKSKEMEMRTTMIDHLLSLQETEPEYYSDQIIKGLILIMLVAGTDTSAVTLEWALAHLLNNPEVLKKARAELDSQTGQDRLVEESDMSKLPYLRAIIFETLRLTPAAPLLVPHYSSEDCTIEGYDVPRNTIVLINAWAIHRDPNHWEDATAFKPERFENGEAVESHKLLPFGLGRRACPGASHAQRVVSLALASLIQCFEWEREDDEEEIDMAEAMGTVMHKVVPLQALCKARPILNKVIAE 506
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
12 779219 780829 + Conep12aG0015500.1 Cone12ag0152 448996
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cone12ag0152 506 PRINTS E-class P450 group I signature 432 442 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cone12ag0152 506 PRINTS E-class P450 group I signature 182 200 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cone12ag0152 506 PRINTS E-class P450 group I signature 442 465 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cone12ag0152 506 PRINTS E-class P450 group I signature 295 312 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cone12ag0152 506 PRINTS E-class P450 group I signature 399 423 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cone12ag0152 506 PRINTS E-class P450 group I signature 63 82 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cone12ag0152 506 PRINTS E-class P450 group I signature 87 108 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cone12ag0152 506 PRINTS E-class P450 group I signature 315 341 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cone12ag0152 506 PRINTS E-class P450 group I signature 358 376 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cone12ag0152 506 PANTHER CYTOCHROME P450 82C3-RELATED 16 497 IPR050651 -
Cone12ag0152 506 Gene3D Cytochrome P450 21 494 IPR036396 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cone12ag0152 506 FunFam Cytochrome P450 family protein 26 500 - -
Cone12ag0152 506 SUPERFAMILY Cytochrome P450 36 497 IPR036396 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cone12ag0152 506 PRINTS P450 superfamily signature 306 323 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cone12ag0152 506 PRINTS P450 superfamily signature 359 370 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cone12ag0152 506 PRINTS P450 superfamily signature 433 442 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cone12ag0152 506 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 435 444 IPR017972 GO:0005506(InterPro)|GO:0016705(InterPro)
Cone12ag0152 506 Pfam Cytochrome P450 36 485 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cone12ag0152 506 CDD CYP81 67 463 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cone12ag0150 Cone-Chr12:770894 Cone12ag0152 Cone-Chr12:779219 0 dispersed
Cone12ag0152 Cone-Chr12:779219 Cone9ag1354 Cone-Chr9:10143679 6.26E-230 dispersed
Cone9ag0577 Cone-Chr9:2720495 Cone12ag0152 Cone-Chr12:779219 6.72E-12 dispersed
Cone12ag0151 Cone-Chr12:773670 Cone12ag0152 Cone-Chr12:779219 1.17e-311 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cone12ag0152 K13260 - csv:101211829 637.491