Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cone12ag0161 ATGCAATTTTCTGAGGCTCCCCCACCACCACCACCTTTGCACCAAATCTCTTCATCGTCGTTTTCCAATAATCTAATATCTATGAACAAATCAAACGAAATCCAAAGAAGTAGTAGTACTAGACCATGGCATGGATCATTTCCAACCTCCACGCTTCTAGGAACAACGACAACAACAAACTTTGGATACACAAATTGCATGGAACAGCTACTAGTCCATTGTGCTAATGCAATCCAATCAAACGACGTCACTTTGGCCCAACAGATCCTATGGGTCCTGAACAACATAACCCCGCCCGACGGCGACTCTAACCAACTGCTCGCTTCCGGGTTCCTCCATGCCCTAATCTCCCGGGCCGCCAACACTGGGATGATCAGCTACAAGATGCTAATGACCTCCATGCCCCCTCCATGTAACAATAATTACAATCCTACCCACAAGTTCTCCGCCGTCGACCTTGCTAGCTTTGTTGACATGACCCCATGGTACCGCTTCGGCTTCACCGCGGCTAACTCGACCATTCTAGATGCAATTGTAGGTTACTCTACGGTTCATATCGTCGATTTGAGCTTGACTCACTGTATGCAAATCCCTACTCTTATCGACTCTATTGCTACTCGTTATGTGAATGAGGCGCCTTTGATAAAGCTCACGGTGGTGGGTCCGACCGACATACCGCCATTGCTGGACCTTTGTTACTATGAATTGGGTTTGAAGCTCGTGAATTTCTCTAGGTCAAGGAATGTTGTCATGAAATTTAGAGTGGTTTCTTCTACTTACAAAGATGGGTTTGCTTCATTACTTGACCATCTAAATATTTTGCAACATTTGGCAAATAATCATAATGTTCATGAGGCACTAATTATAAATTGTCACATGTTGCTTCATTATGTTCCGGAAGAGACCCTATATAGCAATGATAATGCTTTTGGTCATCACCATTTTCCATATCCCTCATCTAATTCATCACATAGAAGCGTATTTTTGAAAGCGATCCGGAGCTTAAATCCAACCATGGTGATTCTAGTCGATGAAGATGCGGATTTGACGTCTAACAACTTGGCATGTCGATTAAGATCGGCTTTTAACTATCTATGGATACCTTATGATACTGTGGATACATTTCTTCCGAGGGGCAGTAAGCAAAGGCAATGGTATGAGGCTAGTATTTGTTGGAAAATTGAGAACTTGATAGGACATGAAGGTGTAGAAAGGGTTGAAAGGGTTGAAGCTAAGAGCAACTGGGTGCAAAGAATGAGAAGTGCTAATTTCAAGAGCATTTCATTTGGTGAAGATGCAGTTTCTGAGATCAAGAGTATGCTTGATAAGCATGCAGCCGGGTGGGGGTTGAAGAAGGAAGTCGATCATAATGATCTTATGCTCACTTGGAAAGGGCATAATGTTGTGTTTGCTACTATTTGGGTGCCTACTTGA 1434 43.17 MQFSEAPPPPPPLHQISSSSFSNNLISMNKSNEIQRSSSTRPWHGSFPTSTLLGTTTTTNFGYTNCMEQLLVHCANAIQSNDVTLAQQILWVLNNITPPDGDSNQLLASGFLHALISRAANTGMISYKMLMTSMPPPCNNNYNPTHKFSAVDLASFVDMTPWYRFGFTAANSTILDAIVGYSTVHIVDLSLTHCMQIPTLIDSIATRYVNEAPLIKLTVVGPTDIPPLLDLCYYELGLKLVNFSRSRNVVMKFRVVSSTYKDGFASLLDHLNILQHLANNHNVHEALIINCHMLLHYVPEETLYSNDNAFGHHHFPYPSSNSSHRSVFLKAIRSLNPTMVILVDEDADLTSNNLACRLRSAFNYLWIPYDTVDTFLPRGSKQRQWYEASICWKIENLIGHEGVERVERVEAKSNWVQRMRSANFKSISFGEDAVSEIKSMLDKHAAGWGLKKEVDHNDLMLTWKGHNVVFATIWVPT 477
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
12 815494 816927 - Conep12aG0016400.1 Cone12ag0161 449005
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cone12ag0161 477 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 49 474 IPR005202 GO:0003700(PANTHER)|GO:0005634(PANTHER)|GO:0006355(PANTHER)|GO:0043565(PANTHER)
Cone12ag0161 477 ProSiteProfiles GRAS family profile. 58 475 IPR005202 -
Cone12ag0161 477 Pfam GRAS domain family 67 474 IPR005202 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cone12ag0161 Cone-Chr12:815494 Cone12ag1405 Cone-Chr12:10309798 1.30E-114 dispersed
Cone12ag0161 Cone-Chr12:815494 Cone12ag0168 Cone-Chr12:849079 2.98E-49 proximal
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
44419 PF17767 NAPRTase_N 3.80E-38 CL0105 Cone TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cone12ag0161 - - - 0.0