Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cone12ag0218 ATGGCTGCTACCTCAGTGCCGGAGAATCTAACTCGCGAGCAGTATGTGTACCTGGCGAAGCTCGCCGAGCAAGCCGAGCGGTACGAGGAGATGGTCAAGTTCATGGAGAAGCTGGTGATAGGATCGAGCTCGATCTCAGAGCTTACCGTCGAGGAACGGAATCTCCTCTCCGTGGCTTACAAGAACGTGATTGGATCTCTCCGAGCTGCCTGGCGTATCATCTCATCGATCGAGCAGAAGGAGGAAGGCCGGAAGAACGAAGAACACGTTGTGCTTGTCAAACAGTATAGATCTAAGGTGGAGGCTGAGCTCTCTGTTGTGTGTGCGGATATCCTGAAGCTCCTGGACTCGCATCTGATTCCGTCAGCTACAAGCGGTGAGTCCAGGGTATTCTACTTGAAGATGAAGGGAGATTACCATAGATATTTGGCTGAATTTCAGATTGGGGATGAGAGGAAAGCAGCTGCTGAGGATACTATGTCTGCTTACAAGGCTGCTCAGGATATTGCACTTGCTGAACTTGCTCCGACACATCCTATAAGACTGGGATTGGCACTTAACTTCTCTGTGTTTTACTATGAGATTATTAATTCGTCAGAGAAAGCTTGTAGCATGGCAAAACAGGCCTTTGAGGAAGCCATTGCTGAGCTTGACACACTGGGTGAAGAGTCCTACAAGGACAGCACTCTCATCATGCAACTGCTGAGGGATAACCTCACTCTTTGGACATCAGATGCCCAGGAGCAAATGGATGAGGCCTAA 762 49.48 MAATSVPENLTREQYVYLAKLAEQAERYEEMVKFMEKLVIGSSSISELTVEERNLLSVAYKNVIGSLRAAWRIISSIEQKEEGRKNEEHVVLVKQYRSKVEAELSVVCADILKLLDSHLIPSATSGESRVFYLKMKGDYHRYLAEFQIGDERKAAAEDTMSAYKAAQDIALAELAPTHPIRLGLALNFSVFYYEIINSSEKACSMAKQAFEEAIAELDTLGEESYKDSTLIMQLLRDNLTLWTSDAQEQMDEA 253
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
12 1123185 1126386 + Conep12aG0022300.1 Cone12ag0218 449062
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cone12ag0218 253 FunFam 14-3-3 protein epsilon 9 253 - -
Cone12ag0218 253 ProSitePatterns 14-3-3 proteins signature 2. 225 244 IPR023409 -
Cone12ag0218 253 Gene3D - 1 253 IPR036815 -
Cone12ag0218 253 Pfam 14-3-3 protein 18 243 IPR023410 -
Cone12ag0218 253 Coils Coil 18 38 - -
Cone12ag0218 253 ProSitePatterns 14-3-3 proteins signature 1. 53 63 IPR023409 -
Cone12ag0218 253 SUPERFAMILY 14-3-3 protein 11 245 IPR036815 -
Cone12ag0218 253 PRINTS 14-3-3 protein zeta signature 96 120 IPR000308 -
Cone12ag0218 253 PRINTS 14-3-3 protein zeta signature 127 149 IPR000308 -
Cone12ag0218 253 PRINTS 14-3-3 protein zeta signature 189 215 IPR000308 -
Cone12ag0218 253 PRINTS 14-3-3 protein zeta signature 216 245 IPR000308 -
Cone12ag0218 253 PRINTS 14-3-3 protein zeta signature 47 76 IPR000308 -
Cone12ag0218 253 PRINTS 14-3-3 protein zeta signature 162 188 IPR000308 -
Cone12ag0218 253 PANTHER 14-3-3 PROTEIN 12 248 IPR000308 GO:0005737(PANTHER)|GO:0007165(PANTHER)|GO:0034613(PANTHER)
Cone12ag0218 253 SMART 1433_4 12 252 IPR023410 -
Cone12ag0218 253 PIRSF 14-3-3 7 253 IPR000308 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cone12ag0218 Cone-Chr12:1123185 Cone4ag1307 Cone-Chr4:10760468 4.71E-150 dispersed
Cone12ag0218 Cone-Chr12:1123185 Cone8ag0206 Cone-Chr8:1113875 9.55E-163 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cone12ag0218 K06630 - mdm:103401608 434.491