Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Cone12ag0266 | ATGAATGATGCAGATGTCTCGAAGCAGATCCAGCAGATGGTGCGGTTCATCCGCCAAGAAGCTGAGGAAAAGGCCAACGAGATCTCCGTCTCGGCTGAAGAAGAGTTCAACATTGAGAAGTTGCAGCTAGTTGAGGCGGAGAAGAAGAAGATCAGGCAAGAGTACGAGAAGAAGGAGAAGCAAGTCGATGTTCGGAAGAAGATTGAATACTCCATGCAACTTAATGCCTCTCGGATTAAAGTTCTGCAAGCTCAAGATGACATCATTAATTCCATGAAAGATGCTGCATCAAAGGAACTCTTGAATGTGAGCCAACAACACAAGAGATACAAGGAGCTTTTGAAAGATCTCATCGTTCAGAGTTTGCTCCGTCTGAAAGAACCTGCTGTCTTGTTGCGCTGCCGTAAAGAAGACAAACAGTTGGTGGAGTCTGTGCTGCGCCCAGCAGCTGAGGAATATGCAGAGAAAGCCCAGGTTTACCCACCAGAGATTATCCTAGACCATAATGTCTATCTTCCACCTGCTCCCAGTCATCACAATGCACATGGTCCTTCCTGCTCTGGAGGTGTAGTCTTAGCTTCTCGAGATGGGAAGATTGTCTTGGAGAACACACTTGATGCAAGGCTGGATGTTGTGTTTCGTAATAAACTTCCTGAGATCCGTAAAAAGCTCGTCGGACAGGCTTGA | 687 | 46.58 | MNDADVSKQIQQMVRFIRQEAEEKANEISVSAEEEFNIEKLQLVEAEKKKIRQEYEKKEKQVDVRKKIEYSMQLNASRIKVLQAQDDIINSMKDAASKELLNVSQQHKRYKELLKDLIVQSLLRLKEPAVLLRCRKEDKQLVESVLRPAAEEYAEKAQVYPPEIILDHNVYLPPAPSHHNAHGPSCSGGVVLASRDGKIVLENTLDARLDVVFRNKLPEIRKKLVGQA | 228 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 12 | 1413403 | 1416264 | + | Conep12aG0027200.1 | Cone12ag0266 | 449110 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Cone12ag0266 | 228 | Gene3D | - | 1 | 62 | - | - | |
| Cone12ag0266 | 228 | Hamap | V-type proton ATPase subunit E [atpE]. | 8 | 226 | IPR002842 | GO:0033178(InterPro)|GO:0046961(InterPro)|GO:1902600(InterPro) | |
| Cone12ag0266 | 228 | Gene3D | - | 92 | 228 | IPR038495 | - | |
| Cone12ag0266 | 228 | Coils | Coil | 38 | 61 | - | - | |
| Cone12ag0266 | 228 | Pfam | ATP synthase (E/31 kDa) subunit | 16 | 224 | IPR002842 | GO:0033178(InterPro)|GO:0046961(InterPro)|GO:1902600(InterPro) | |
| Cone12ag0266 | 228 | SUPERFAMILY | V-type ATPase subunit E-like | 87 | 224 | - | - | |
| Cone12ag0266 | 228 | PANTHER | ATPASE H+-TRANSPORTING V1 SUBUNIT E1A-RELATED | 1 | 227 | IPR002842 | GO:0033178(InterPro)|GO:0046961(InterPro)|GO:0046961(PANTHER)|GO:1902600(InterPro) |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Cone12ag0266 | Cone-Chr12:1413403 | Cone8ag0260 | Cone-Chr8:1504354 | 6.77E-135 | wgd |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Cone12ag0266 | K02150 | - | vvi:100246834 | 381.719 |