Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Cone12ag0301 | ATGGATGCATCGACCGTCTTAATTATCCTATCGGCAATAGCGGCGTATTTAATATGGTTCGGCATCATGTCGCGGCTTTTAACTGGTCCACGTGTATGGCCTTTATTGGGCAGTCTTCCCGGGCTTATCAAAAACTCTCATCGCTTGCATGATTGGATCACAGAGAACCTCAGCCAGTGTGGAGGCACGTACCAGACCTGCACGTGCGCTGTTCCCTCTCTGGCCCGCAAGCAGGGTCTCGTGACTGTCACGTGCGATCCGAAGAACTTGGAGCACATTTTGAAGCTCCGGTTTGATAACTACCCCAAGGGACCCAACTGGCAGGGTGTGTTCCATGATTTGTTGGGTGATGGCATCTTCAACTCGGATGGTGACACGTGGCTGTTCCAGAGGAAAACGGCTGCACTTGAATTCACCACTAGGACACTCCGACAAGCCATGGCACGATGGGTGAGCCGCTCCATTAAGCTTAGGTTCTGCCCGATTCTGGAGACGGCTCAACGGGAAGCTAAGCCTGTCGACCTTCAAGACCTATTGCTTCGACTCACGTTCGACAATATATGCGGGTTAGCCTTCGGTAAGGACCCGGAAACTCTTTCTCCGGAACTGCCCGAAAACGGCTTTGCTCTGGCTTTCGACCGAGCTACCGAAGCCTCGTTGCGGCGATTCATCATGCCTAATGTTATATGGAAGATCAAGAAATGGCTCCGGCTCGGGATGGAAGTCAGCTTAGTCCATAGCCTAGAACATATTGAGAAGTACATGGCTGATATCATCGAGACGCGGAAACGCGAGTTATTGAGCCGACAGCAAGCCGAAAACGGGAACCCACATGATGATTTGTTGTCTAGGTTCATGAAGAAAAAGGAATCTTACTCGAATACTTTCCTACAACACGTGGCGCTCAACTTCATCCTAGCTGGACGGGACACGTCATCCGTAGCCCTGAGCTGGTTCTTCTGGTTGGTCAGTATAAACCCAAGAGTAGAAGAAAAAATATTGATCGAATTATGCTCTGTCTTGATGGAGACACGTGGCGATGACCCATCAAAATGGGTGGAAGAGTCCTTAGCGTTTGAAGAAATTGACCGATTGATATACCTTAAGGCTGCATTATCTGAAACTCTTAGGCTATACCCTTCAGTGCCTGAAGACTCGAAGCACGTAATCGACGACGACGTTTTGCCAAGTGGGGCCGTGGTGCCAGCTGGCTCGTCCATCACGTATTCAATTTACGCAACGGGTCGGATGAAGTATATATGGGGAGATGATTGTTCGGAATTCAAGCCGGAAAGATGGTTGTCCCCTGACGGTAAGAAATTTGAGATGCATGATTCGTACAAGTTTGTAGCGTTTAATGCAGGTCCGAGAATCTGCTTAGGAAAGGACTTGGCTTATTTACAGATGAAGTCGATAGCGGCATCGGTGCTACTGCGGCACCGACTTACAGTCGCTCGGGGTCACCGGGTCGAGCAGAAGATGTCCTTGACATTGTTCATGAAGTATGGTCTCAAGGTTGATGTGCACCCAAGGGACTTAGAGAATGTGGTGGAGAAGATAAGGAAGAGTGGGTCATGGCTTAATGAATGA | 1590 | 49.37 | MDASTVLIILSAIAAYLIWFGIMSRLLTGPRVWPLLGSLPGLIKNSHRLHDWITENLSQCGGTYQTCTCAVPSLARKQGLVTVTCDPKNLEHILKLRFDNYPKGPNWQGVFHDLLGDGIFNSDGDTWLFQRKTAALEFTTRTLRQAMARWVSRSIKLRFCPILETAQREAKPVDLQDLLLRLTFDNICGLAFGKDPETLSPELPENGFALAFDRATEASLRRFIMPNVIWKIKKWLRLGMEVSLVHSLEHIEKYMADIIETRKRELLSRQQAENGNPHDDLLSRFMKKKESYSNTFLQHVALNFILAGRDTSSVALSWFFWLVSINPRVEEKILIELCSVLMETRGDDPSKWVEESLAFEEIDRLIYLKAALSETLRLYPSVPEDSKHVIDDDVLPSGAVVPAGSSITYSIYATGRMKYIWGDDCSEFKPERWLSPDGKKFEMHDSYKFVAFNAGPRICLGKDLAYLQMKSIAASVLLRHRLTVARGHRVEQKMSLTLFMKYGLKVDVHPRDLENVVEKIRKSGSWLNE | 529 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 12 | 1644993 | 1647169 | + | Conep12aG0031400.1 | Cone12ag0301 | 449145 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Cone12ag0301 | 529 | FunFam | Cytochrome P450 | 21 | 514 | - | - | |
| Cone12ag0301 | 529 | PRINTS | E-class P450 group I signature | 296 | 313 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cone12ag0301 | 529 | PRINTS | E-class P450 group I signature | 449 | 459 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cone12ag0301 | 529 | PRINTS | E-class P450 group I signature | 459 | 482 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cone12ag0301 | 529 | PRINTS | E-class P450 group I signature | 316 | 342 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cone12ag0301 | 529 | PRINTS | E-class P450 group I signature | 369 | 387 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cone12ag0301 | 529 | Pfam | Cytochrome P450 | 29 | 497 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cone12ag0301 | 529 | PANTHER | CYTOCHROME P450 | 18 | 504 | - | - | |
| Cone12ag0301 | 529 | ProSitePatterns | Cytochrome P450 cysteine heme-iron ligand signature. | 452 | 461 | IPR017972 | GO:0005506(InterPro)|GO:0016705(InterPro) | |
| Cone12ag0301 | 529 | CDD | CYP86A | 67 | 504 | - | - | |
| Cone12ag0301 | 529 | PRINTS | P450 superfamily signature | 459 | 470 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cone12ag0301 | 529 | PRINTS | P450 superfamily signature | 370 | 381 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cone12ag0301 | 529 | PRINTS | P450 superfamily signature | 307 | 324 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cone12ag0301 | 529 | PRINTS | P450 superfamily signature | 450 | 459 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cone12ag0301 | 529 | Gene3D | Cytochrome P450 | 24 | 511 | IPR036396 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cone12ag0301 | 529 | SUPERFAMILY | Cytochrome P450 | 25 | 511 | IPR036396 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Cone12ag0301 | Cone-Chr12:1644993 | Cone1ag0585 | Cone-Chr1:5854590 | 8.77E-242 | dispersed | |
| Cone12ag0301 | Cone-Chr12:1644993 | Cone14ag0365 | Cone-Chr14:1691857 | 1.36E-283 | wgd | |
| Cone12ag0301 | Cone-Chr12:1644993 | Cone15ag0402 | Cone-Chr15:1882916 | 7.37E-287 | wgd | |
| Cone12ag0301 | Cone-Chr12:1644993 | Cone8ag0297 | Cone-Chr8:1714016 | 0 | wgd |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Cone12ag0301 | K15398 | - | mdm:114821007 | 865.914 |