Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cone12ag0341 ATGGCAGAGCTACTAAGAAACCCGGAAACCATGTCAAAAGTAAAAGAAGAACTAAATCAAGTAATTGGCAAAGAAAAACCAGTTGAAGAATCAGACGTATCCCGCTTACCTTATCTCCAAGCAATCGTCAAAGAAACATTTCGGTTACACCCAGCCATTCCTCCTCTACTTCTTCGGAAAGCCCAAAAAGATGTACAAATTGCCGGTTTCACTATTCCGAAAGATGTACAAGTAATTACTAATGCATGGGCAATTGGCAGAGATCCGAAGTCGTGGAAGAACCCGGATTCATTCATCCCCGATAGGTTTTTAGGGTCAGATGTTGATGTTAGAGGTAGAAGCTTCAAGCTTTTGCCGTTTGGATGCCGACGGAGAATTTGCCCCAGGTTGCCGTTGGCTATGAGAATGTTGCATTTGATGTTGGGTTCTCTTGTTAACTCTTTTGATTGGAAGCTTGAAGAAGGAATGGGCCCAGATGACATGAACATGGATGAAAAGGTTGGAATTAGTTTAGAGATGGCTTGCCCATTGAGAGCTGTTCCAATTCTTGTGTGA 555 42.7 MAELLRNPETMSKVKEELNQVIGKEKPVEESDVSRLPYLQAIVKETFRLHPAIPPLLLRKAQKDVQIAGFTIPKDVQVITNAWAIGRDPKSWKNPDSFIPDRFLGSDVDVRGRSFKLLPFGCRRRICPRLPLAMRMLHLMLGSLVNSFDWKLEEGMGPDDMNMDEKVGISLEMACPLRAVPILV 184
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
12 1858911 1859465 + Conep12aG0035600.1 Cone12ag0341 449185
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cone12ag0341 184 FunFam Os10g0167200 protein 1 180 - -
Cone12ag0341 184 PRINTS E-class P450 group I signature 40 58 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cone12ag0341 184 PRINTS E-class P450 group I signature 117 127 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cone12ag0341 184 PRINTS E-class P450 group I signature 81 105 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cone12ag0341 184 PRINTS E-class P450 group I signature 127 150 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cone12ag0341 184 PRINTS P450 superfamily signature 118 127 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cone12ag0341 184 PRINTS P450 superfamily signature 41 52 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cone12ag0341 184 PRINTS P450 superfamily signature 6 19 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cone12ag0341 184 SUPERFAMILY Cytochrome P450 1 180 IPR036396 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cone12ag0341 184 Pfam Cytochrome P450 2 165 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cone12ag0341 184 Gene3D Cytochrome P450 1 176 IPR036396 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cone12ag0341 184 PANTHER CYTOCHROME P450, FAMILY 76, SUBFAMILY C, POLYPEPTIDE 5-RELATED 1 182 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cone12ag0341 Cone-Chr12:1858911 Cone19ag1115 Cone-Chr19:8024764 1.88E-73 dispersed
Cone12ag0341 Cone-Chr12:1858911 Cone8ag0346 Cone-Chr8:1982584 2.17E-106 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cone12ag0341 - - - 0.0