Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cone12ag0347 | ATGGATCATTCCCATTCTCTTCCGCCTCCATTTCACACAAAAGATTACCATCTACAACATCAGTTCAACCACCACCAACAACAGAATTGCGAGGAAGAGCAAAGCGGTAGTAGTGGACTAAGCCGTGCCCAGAAACGTGAAAGAGATGACAATACCAACAGTGGCAATCATCATCATCAAGGTGGTAATGGTATCCCCGGTGGGTCTGGTGAAGAAGAAAGCACTGGAAGGCCTCGTGGTAGGCCTGCTGGATCCAAGAACAAGCCCAAACCACCCATCATCATCACACGTGATAGTGCAAACGCCCTCCGCACCCACATGATTGAGGTCACTGACGGGTGCGATATCGTCGAAAGTGTGGCCACTTTCACCAGGCGGCGACAGAGAGGAGTGTGCATTATGAGCGGGACCGGAACAGTTGCAAACGTGACATTAAGACAACCGGCATCACCAGGGGCAATAGTGACATTACATGGCCGCTTCGAGATCCTATCCCTAGCTGGGTCGTTTTTACCACCACCAGCTCCGCCGGAAGCAACAGGGTTGACCATATATCTGGCTGGGGGACAAGGCCAGGTGGTGGGAGGGAGTGTAGTCGGGACGTTGATGGCGTCAGGACCGGTGGTGATTATGGCAGCATCATTCAGTAATGCTGCTTATGAGCGGCTTCCTCTGGAGGAGGATGAGGGTCAAGGGCTAGCAATGCAAGGTGGTGGCTCAATTGGGTCACCTGGTGGTGGTGGTGGTGGTGGTGGAGGTGGTGGCCAACAACAACAAACACCGCATCAACTTTTAGGGGATGCAAGTGGGCCTTTGTATCATGGAATGCCTCAAAATCTACTCAACTCAATTCAAATTCCAAATGAAGCAGCTTATTGGGCCACAGGTCGGCCTCCATACTGA | 903 | 52.05 | MDHSHSLPPPFHTKDYHLQHQFNHHQQQNCEEEQSGSSGLSRAQKRERDDNTNSGNHHHQGGNGIPGGSGEEESTGRPRGRPAGSKNKPKPPIIITRDSANALRTHMIEVTDGCDIVESVATFTRRRQRGVCIMSGTGTVANVTLRQPASPGAIVTLHGRFEILSLAGSFLPPPAPPEATGLTIYLAGGQGQVVGGSVVGTLMASGPVVIMAASFSNAAYERLPLEEDEGQGLAMQGGGSIGSPGGGGGGGGGGGQQQQTPHQLLGDASGPLYHGMPQNLLNSIQIPNEAAYWATGRPPY | 300 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
12 | 1886783 | 1887685 | - | Conep12aG0036200.1 | Cone12ag0347 | 449191 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cone12ag0347 | 300 | CDD | DUF296 | 104 | 187 | IPR005175 | - | |
Cone12ag0347 | 300 | ProSiteProfiles | PPC domain profile profile. | 100 | 239 | IPR005175 | - | |
Cone12ag0347 | 300 | MobiDBLite | consensus disorder prediction | 231 | 271 | - | - | |
Cone12ag0347 | 300 | PANTHER | AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 15 | 33 | 300 | IPR014476 | GO:0003680(InterPro)|GO:0003680(PANTHER)|GO:0003700(PANTHER)|GO:0005634(PANTHER)|GO:0010228(PANTHER) | |
Cone12ag0347 | 300 | Pfam | Plants and Prokaryotes Conserved (PCC) domain | 104 | 216 | IPR005175 | - | |
Cone12ag0347 | 300 | PIRSF | ESCAROLA | 12 | 300 | IPR014476 | GO:0003680(InterPro) | |
Cone12ag0347 | 300 | SUPERFAMILY | AF0104/ALDC/Ptd012-like | 100 | 229 | - | - | |
Cone12ag0347 | 300 | MobiDBLite | consensus disorder prediction | 22 | 41 | - | - | |
Cone12ag0347 | 300 | MobiDBLite | consensus disorder prediction | 1 | 94 | - | - | |
Cone12ag0347 | 300 | Gene3D | - | 103 | 236 | - | - | |
Cone12ag0347 | 300 | FunFam | AT-hook motif nuclear-localized protein | 103 | 230 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cone12ag0347 | Cone-Chr12:1886783 | Cone9ag0727 | Cone-Chr9:3470444 | 1.09E-114 | dispersed | |
Cone12ag0347 | Cone-Chr12:1886783 | Cone12ag0349 | Cone-Chr12:1934171 | 1.25E-21 | proximal | |
Cone12ag0347 | Cone-Chr12:1886783 | Cone8ag0353 | Cone-Chr8:2019529 | 1.18E-154 | wgd | |
Cone12ag0347 | Cone-Chr12:1886783 | Cone9ag0724 | Cone-Chr9:3455326 | 2.29E-22 | wgd |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cone12ag0347 | - | - | - | 0.0 |