Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cone12ag0459 | ATGGCGGGTTTAGATTTAAGCAATAATTACTTTCACCATCTTCATCTTCCTTCTGATCAACAGCAACAACGCATACCCGACTCAGAAGAACATCAACCAGATGATGCTAACCTTGGATCCCACCGCCGTCCACGTGGCAGACCTTCTGGCTCAAAAAATAAACCGAAACCACCCATCATCGTCACCAGAGAGAGCGCTAACACCCTCCGCGCTCACATCCTCGAAGTATCGGACGGCAGCGATGTGTTCGAGAGCGTGTCGATCTATGCACGCCACCGCCAGCGCGGCATCTGCATACTGAGCGGGAGTGGGACCGTCACAAACGTTAGCTTACGTCAGCCAGCAGCAAGCGGAACCGTAGCGACTCTTCAAGGGAGGTTCGAGATATTATCGCTTTCCGGTTCATTTCTGCCCCCGCCGGCCCCGCCCGGGGCAACGAGTTTGACAATTTATTTAGGAGGCGGGCAGGGGCAGGTGTTTGGGGGGAGCGTGGTCGGGGAGTTGATAGCCTCTGGTCCGGTTATTGTCATAGCGGCATCGTTTACGAATGTAGCGTATGAGAGATTGCCTTTAGATGAACAAGTACATGAGGACTTGGCACAAATAGAGACTGGTCAAGGTCATGTAATGGGTGATGGTAACGGATTAATGCAAGATGGGGTTAATTCAGGGCTAGGGTTTCTGAACATGCCAATTGGTACTAATAGTAATAATAATCTGCAGAATGTTCAGCTCCAGGTCGATGGGTGGGGGCATTATATGAATTCTACAGGGGTTCGGAGTACTACTACTACTCCATTTTGA | 804 | 50.5 | MAGLDLSNNYFHHLHLPSDQQQQRIPDSEEHQPDDANLGSHRRPRGRPSGSKNKPKPPIIVTRESANTLRAHILEVSDGSDVFESVSIYARHRQRGICILSGSGTVTNVSLRQPAASGTVATLQGRFEILSLSGSFLPPPAPPGATSLTIYLGGGQGQVFGGSVVGELIASGPVIVIAASFTNVAYERLPLDEQVHEDLAQIETGQGHVMGDGNGLMQDGVNSGLGFLNMPIGTNSNNNLQNVQLQVDGWGHYMNSTGVRSTTTTPF | 267 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
12 | 2872632 | 2873711 | + | Conep12aG0047700.1 | Cone12ag0459 | 449303 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cone12ag0459 | 267 | MobiDBLite | consensus disorder prediction | 24 | 42 | - | - | |
Cone12ag0459 | 267 | PANTHER | AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 15 | 23 | 222 | IPR014476 | GO:0003680(InterPro)|GO:0003680(PANTHER)|GO:0003700(PANTHER)|GO:0005634(PANTHER) | |
Cone12ag0459 | 267 | SUPERFAMILY | AF0104/ALDC/Ptd012-like | 66 | 195 | - | - | |
Cone12ag0459 | 267 | CDD | DUF296 | 70 | 181 | IPR005175 | - | |
Cone12ag0459 | 267 | Pfam | Plants and Prokaryotes Conserved (PCC) domain | 70 | 182 | IPR005175 | - | |
Cone12ag0459 | 267 | ProSiteProfiles | PPC domain profile profile. | 66 | 203 | IPR005175 | - | |
Cone12ag0459 | 267 | FunFam | AT-hook motif nuclear-localized protein | 69 | 197 | - | - | |
Cone12ag0459 | 267 | PIRSF | ESCAROLA | 5 | 264 | IPR014476 | GO:0003680(InterPro) | |
Cone12ag0459 | 267 | Gene3D | - | 69 | 206 | - | - | |
Cone12ag0459 | 267 | MobiDBLite | consensus disorder prediction | 18 | 59 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cone12ag0459 | Cone-Chr12:2872632 | Cone7ag0452 | Cone-Chr7:2047086 | 3.25E-96 | dispersed | |
Cone12ag0459 | Cone-Chr12:2872632 | Cone12ag0461 | Cone-Chr12:2893829 | 6.76E-20 | proximal | |
Cone12ag0459 | Cone-Chr12:2872632 | Cone14ag0306 | Cone-Chr14:1406920 | 2.22E-20 | wgd | |
Cone12ag0459 | Cone-Chr12:2872632 | Cone8ag0466 | Cone-Chr8:3052220 | 1.11E-157 | wgd |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cone12ag0459 | - | - | - | 0.0 |