Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cone12ag0478 ATGACATTAGTAAGAGAAAGAAGACATCGACAAGCACTTAGGCTTTCATTACCACCTGCAATCCACTCCTTTAGTTTCAATTATCAAACACATTTTCTACCCTTACCATCTTCTCCTTCAAGCTCCTCCTCTTCTACTAGTAGCAATCCCAACTCACCTGCCATTCAAAACCTATGTGATCTCGAAAAACTAGCCGCTCTCGGGCAGGGTAGTGGTGGGACTGTCTACAAAGTCCGTCACAGGAAAACCTTGGCTGTCTACGCGTTAAAAGTTCTCCGATTTGATCAAAATGCCCCCAACAATATCCTCAAACAAGCTACCCGGGAAGCCCAGATCATGAAACTTGTCAACTCCCAATACATTATAAGATGTCACGGCATTTTTGACGTTGAAGTTAATGGATCACGTCATGATTTATGTTTTGTAATGGAATACATGGAAGGTGGGTCCCTCCAGGATGTACTTTGGTCCCGCCGGAGGTTGCCTGAGCATTTGATAGCTGATGTGGCGAGACAGGTTCTCGAAGGTTTAAGATATTTACATGGTATGCAGATAGTTCATAGAGATATAAAACCGTCAAATCTTCTTATAAATAATAAAGGGGAAGTGAAGATTGCTGATTTTGGAGTGAGCAATTATACAGCGAGTTCCACTGGCACGTGTGAATCATGTGACGGGTATATGGGCACGTGCGCTTATATGAGTCCAGAAAGATTTGATCCGGAGAGATATGGAGATAATAATTTTGCTGATGGTTTTGCTGGGGATATTTGGTCACTTGGAGTTGTGGTCTTGCAGTGTTTGATGGGCCGGTTTCCGCTGATCGGGGTGGGCCAGGTGCCCGACTGGACCACGTTGATGTGTGCAATTTGCTTTGCGGAGAAGTTTGAGATGCCGGAAATGGCCTCACCAGAGTTTAGAAGCTTTGTGTGGAGGTGTATGGAGAAGGATTGGAGGAAGAGGGCCAAGGTGGATGAGCTTCTAGAGCACCCTTTTGTTAATAAAGTTAGATCATGCAGATCTACAGAAGCTTTAGTTGATTTATGA 1047 44.22 MTLVRERRHRQALRLSLPPAIHSFSFNYQTHFLPLPSSPSSSSSSTSSNPNSPAIQNLCDLEKLAALGQGSGGTVYKVRHRKTLAVYALKVLRFDQNAPNNILKQATREAQIMKLVNSQYIIRCHGIFDVEVNGSRHDLCFVMEYMEGGSLQDVLWSRRRLPEHLIADVARQVLEGLRYLHGMQIVHRDIKPSNLLINNKGEVKIADFGVSNYTASSTGTCESCDGYMGTCAYMSPERFDPERYGDNNFADGFAGDIWSLGVVVLQCLMGRFPLIGVGQVPDWTTLMCAICFAEKFEMPEMASPEFRSFVWRCMEKDWRKRAKVDELLEHPFVNKVRSCRSTEALVDL 348
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
12 3105733 3106779 + Conep12aG0049700.1 Cone12ag0478 449322
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cone12ag0478 348 PANTHER DUAL SPECIFICITY MITOGEN-ACTIVATED PROTEIN KINASE KINASE 5-RELATED 56 335 - GO:0000165(PANTHER)|GO:0004708(PANTHER)
Cone12ag0478 348 Pfam Protein kinase domain 62 333 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cone12ag0478 348 Gene3D Transferase(Phosphotransferase) domain 1 56 346 - -
Cone12ag0478 348 SMART serkin_6 61 333 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cone12ag0478 348 CDD PKc_MAPKK_plant_like 60 335 - -
Cone12ag0478 348 ProSiteProfiles Protein kinase domain profile. 61 333 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cone12ag0478 348 ProSitePatterns Serine/Threonine protein kinases active-site signature. 185 197 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Cone12ag0478 348 SUPERFAMILY Protein kinase-like (PK-like) 61 337 IPR011009 -
Cone12ag0478 348 ProSitePatterns Protein kinases ATP-binding region signature. 67 90 IPR017441 GO:0005524(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cone12ag0478 Cone-Chr12:3105733 Cone2ag0738 Cone-Chr2:33145279 3.61E-96 dispersed
Cone12ag0478 Cone-Chr12:3105733 Cone8ag0483 Cone-Chr8:3319602 6.75E-163 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
81950 PF00067 p450 4.50E-97 No_clan Cone PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cone12ag0478 - - - 0.0