Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Cone12ag0525 ATGTTTACATGCATGACAGCATGTACGAAGCAAACACAGGAGGATGGTGGAGACGACGAACATGGAGGAGCGCGTGGCGGTGGCAGCGGCACACCAAGTACGAAGGAAGCTGTCAAAAGTCTGACGGCGCAGATAAAGGACATGGCTTTGAAAGTTTCGGGTACTTATCGACAATGCAAACCTTGTACGGGGTCCACAAGCTACAAGAAAGGACATAGGCCCTACCCGGATTTTGATACAGCTTCTGAGGGGGTCCCATATCCCTTCATTGGAGGTGCAAGCTCAAGTTCTACACCTGCATGGGATTTTCCAAGTGCTAATCATCACCAAAATACAAGGTCGGAATCTAGATTTGCCGCAGACCGCACCCCTGGAGGGGGATTTGAGTCTTTTGATGTAGTGCTTGATGATGAGCCTAAAGAATGGATGGCTCAGGTTGAGCCTGGAGTTCATATCACTTTTGTTTCTCTTCCAAATGGTGGAAACGACCTTAAACGAATTCGTTTTAGCCGAGAAATGTTTAATAAATGGCAAGCTCAAAGATGGTGGGGCGAGAACTATGACCGGATTATGGAGCTTTATAATGTTCAGAGATTCAATCGACAAGCCCTTCAGACTCCGCCAAGGTCCGAAGATGGGAGAGACTCTTCCTACTCGAGGATGGGATCAGCAATGGAGAGTCCAATGGGTTCTTCTTTACACAAGGATTGGACTCCAAGGAGCCACTACAAACCATCATTTTCTGGGAACAACAAAGGCTATTTCCCTTCTGATTCTATGGACCAAGGTGGGACACACCATTATAATGCTGCTGGCTCAAGTGCTTATGCTGGTGGGCCCAGGGGGATCGAAACACCGTCTCTCGAGGCTTCCCGGACAACAACCTCGTCTCGAGATGAGGCTTCGGTCTCTGTCAGCAATGCAAGTGATCTTGACTCGGAGTGGGTCGAGGAAGACGAGCCCGGAGTTTATATTACGATTAGACAGCTGTCTGATGGCAGTAGAGAGCTCCGCCGTGTTAGATTTAGCCGTGAAAGATTTGGTGAAGTACATGCAAAGATGTGGTGGGAAGACAACAGAGAGAGAATACAAGCACAATACCTTTAA 1107 48.15 MFTCMTACTKQTQEDGGDDEHGGARGGGSGTPSTKEAVKSLTAQIKDMALKVSGTYRQCKPCTGSTSYKKGHRPYPDFDTASEGVPYPFIGGASSSSTPAWDFPSANHHQNTRSESRFAADRTPGGGFESFDVVLDDEPKEWMAQVEPGVHITFVSLPNGGNDLKRIRFSREMFNKWQAQRWWGENYDRIMELYNVQRFNRQALQTPPRSEDGRDSSYSRMGSAMESPMGSSLHKDWTPRSHYKPSFSGNNKGYFPSDSMDQGGTHHYNAAGSSAYAGGPRGIETPSLEASRTTTSSRDEASVSVSNASDLDSEWVEEDEPGVYITIRQLSDGSRELRRVRFSRERFGEVHAKMWWEDNRERIQAQYL 368
       

Gff information


Chromosome Start End Strand Old_gene Gene Num
12 3632272 3635632 + Conep12aG0054600.1 Cone12ag0525 449369
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Cone12ag0525 368 ProSiteProfiles BRX domain profile. 140 195 IPR013591 -
Cone12ag0525 368 MobiDBLite consensus disorder prediction 287 306 - -
Cone12ag0525 368 MobiDBLite consensus disorder prediction 1 37 - -
Cone12ag0525 368 MobiDBLite consensus disorder prediction 203 237 - -
Cone12ag0525 368 MobiDBLite consensus disorder prediction 254 269 - -
Cone12ag0525 368 Pfam Transcription factor regulating root and shoot growth via Pin3 313 367 IPR013591 -
Cone12ag0525 368 Pfam Transcription factor regulating root and shoot growth via Pin3 140 194 IPR013591 -
Cone12ag0525 368 MobiDBLite consensus disorder prediction 254 306 - -
Cone12ag0525 368 PANTHER PROTEIN BREVIS RADIX-LIKE 1 1 368 IPR044532 -
Cone12ag0525 368 ProSiteProfiles BRX domain profile. 313 368 IPR013591 -
Cone12ag0525 368 MobiDBLite consensus disorder prediction 98 124 - -
Cone12ag0525 368 MobiDBLite consensus disorder prediction 98 113 - -
Cone12ag0525 368 Pfam Transcription factor BRX N-terminal domain 30 62 IPR027988 -
       

Duplication type information


Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cone12ag0525 Cone-Chr12:3632272 Cone4ag0810 Cone-Chr4:5144668 4.91E-93 dispersed
Cone12ag0525 Cone-Chr12:3632272 Cone8ag0525 Cone-Chr8:3789135 1.76E-255 wgd
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cone12ag0525 - - - 0.0