Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cone12ag0570 ATGGAGGTGCAACATTCTGAACATGGGAATATAATTGAGGTAAGTGGGGACGTGCCATCAATAGCAGTGGGTATGAGTGGAAGCAAGGTTTGTGGGGAAGCACCATGTAATTTTTCCGATTCTAAAAACAGTAATAATGACGCAAAGGAAAGATCCTCCTCAATGCGAAAGCTCTGGATAGCAGTTGTGCTTTGTGTGATTTTCATGGCAATTGAAGTGGTTGGAGGTATCAAAGCAAACAGTCTTGCCATTTTGACAGATGCAGCTCATTTACTGTCAGATGTTGCCGCCTTTGCCATCTCTTTATTCACAATCTGGGCTTCTGGGTGGGAAGCTACTCCTCGTCAATCCTATGGTTTTTTCCGGATTGAAATATTGGGTGCTCTTGTTTCCATCCAGATGATATGGCTTCTTGCAGGAATCCTTGTTTATGAAGCCATAAGTAGACTCATAAATGATACGGTGGTGAACATTGCAATGGCAATATTGCTTGGTCATGATCATGGTCACGGTCACGGTCACGGTCACGGTCACGGTCACGGGCATTCCCATTCGCACGGACATGATCATTCCCATTTGCACGGACGTGGTCATTCCCTTTCGCATGGACGTGGTCATTCCTATTCGCATGTACATGGTCATGATGATCATAATCATAATGACCATGGTCATCATCACCATCACGGGATAAGCGTTACCAAGCATCATCATCATGCTCACCGTGAAGATCAGGTTGAGCCCCTTCTTGAGAAAGAAAGCCAGGCTGTTAAACAGGAGAGGAATGTAAATTTGCAAGGGGCCTACCTTCATGTGTTGGGCGATTCTATTCAGAGTATTGGAGTAATGATAGGTGGGGCCGTCATATGGCATAAACCGGAGTGGAAGGTGATTGACCTTATATGCACTCTGATTTTTTCGGTAATTGTGCTGGGAACTACAATTAGGATGCTACGGAACATTCTTGAAGTGCTGATGGAGAGTACACCTAGAGAGATTGATGCGACGAAGCTGGAGAAAGGGCTTTGTGAGATGGATGAGGTGGTTGCTATACATGAGTTGCATATTTGGGCCATAACTGTTGGTAAGGTGCTTCTGGCTTGTCATGTTATAATTAGACCAGAAGCCGATGCTGATATGGTGCTTGACAAGAGTTGCAAGACCATAGCTGTTCTGGAATTTCACAAACCTTTTCCCACTGAACTAGTTTGGGTTGGGTTCATCAGTTAA 1227 44.66 MEVQHSEHGNIIEVSGDVPSIAVGMSGSKVCGEAPCNFSDSKNSNNDAKERSSSMRKLWIAVVLCVIFMAIEVVGGIKANSLAILTDAAHLLSDVAAFAISLFTIWASGWEATPRQSYGFFRIEILGALVSIQMIWLLAGILVYEAISRLINDTVVNIAMAILLGHDHGHGHGHGHGHGHGHSHSHGHDHSHLHGRGHSLSHGRGHSYSHVHGHDDHNHNDHGHHHHHGISVTKHHHHAHREDQVEPLLEKESQAVKQERNVNLQGAYLHVLGDSIQSIGVMIGGAVIWHKPEWKVIDLICTLIFSVIVLGTTIRMLRNILEVLMESTPREIDATKLEKGLCEMDEVVAIHELHIWAITVGKVLLACHVIIRPEADADMVLDKSCKTIAVLEFHKPFPTELVWVGFIS 408
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
12 4186403 4187945 + Conep12aG0059100.1 Cone12ag0570 449414
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cone12ag0570 408 SUPERFAMILY Cation efflux protein transmembrane domain-like 52 326 IPR027469 -
Cone12ag0570 408 MobiDBLite consensus disorder prediction 208 222 - -
Cone12ag0570 408 MobiDBLite consensus disorder prediction 171 207 - -
Cone12ag0570 408 MobiDBLite consensus disorder prediction 170 246 - -
Cone12ag0570 408 Gene3D Cation efflux protein transmembrane domain 54 194 IPR027469 -
Cone12ag0570 408 Gene3D Cation efflux protein transmembrane domain 208 324 IPR027469 -
Cone12ag0570 408 Pfam Cation efflux family 242 325 IPR002524 GO:0006812(InterPro)|GO:0008324(InterPro)|GO:0016020(InterPro)|GO:0055085(InterPro)
Cone12ag0570 408 Pfam Cation efflux family 58 164 IPR002524 GO:0006812(InterPro)|GO:0008324(InterPro)|GO:0016020(InterPro)|GO:0055085(InterPro)
Cone12ag0570 408 NCBIfam cation diffusion facilitator family transporter 55 382 IPR002524 GO:0006812(InterPro)|GO:0008324(InterPro)|GO:0016020(InterPro)|GO:0055085(InterPro)
Cone12ag0570 408 PANTHER CATION EFFLUX PROTEIN/ ZINC TRANSPORTER 26 388 IPR050681 GO:0005385(PANTHER)|GO:0005773(PANTHER)|GO:0005886(PANTHER)|GO:0071577(PANTHER)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cone12ag0570 Cone-Chr12:4186403 Cone8ag0583 Cone-Chr8:4840321 1.07E-188 dispersed
Cone12ag0570 Cone-Chr12:4186403 Cone15ag0501 Cone-Chr15:2403507 1.18E-144 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cone12ag0570 K14689 - rcu:8288876 479.944