Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cone12ag0594 ATGGCTGGCTCCTGGAGGCCGTCTTTGATCCTCCCTGCAATCGTCTTTTTCGGATTCCTATTTGCATTTTCCATTGCGAAAGAGGAAGCAACAAAGTTGGGAACAGTCATCGGGATAGATCTTGGGACAACTTATTCCTGTGTTGGTGTTTATAAGAACGGACATGTTGAAATCATAGCCAATGACCAGGGGAACCGTATTACCCCATCATGGGTTGCTTTCACCGACAGTGAGAGATTGATTGGTGAGGCGGCAAAGAATCAAGCTGCTGTCAATCCTGAGAGGACTATCTTTGATGTCAAAAGACTTATCGGAAGAAAGTTTGAGGACAAAGAAGTTCAGAGGGATATGAAGCTTGTGCCATTTAAAATTGTGAATAGGGATGGAAAGCCTTATATTCAAGTCAAGATCAAGGATGGTGAGACCAAAGTTTTCAGCCCTGAGGAGGTCAGTGCCATGATTCTGACTAAGATGAAGGAAACAGCTGAAGCATTCCTAGGGAAGAAAATCAAGGATGCTGTTGTTACAGTTCCTGCTTACTTTAATGATGCCCAGAGGCAGGCCACTAAAGATGCCGGTGTTATTGCTGGGCTCAATGTTGCCAGAATTATAAACGAACCCACTGCAGCTGCCATAGCCTATGGCTTGGACAAGAAAGGTGGTGAGAAGAACATTCTTGTGTTTGACCTTGGTGGTGGGACATTCGATGTTAGTATTTTAACAATTGACAATGGTGTCTTTGAGGTTCTTGCCACACATGGAGACACTCATTTGGGAGGTGAGGATTTTGATCAGAGGATTATGGAATACTTCATTAAGTTGATAAAGAAGAAGCACGGAAAGGACATCAGCAAGGACAACAGAGCTCTTGGAAAGCTAAGAAGAGAAGCCGAGCGCGCCAAAAGAGCATTGAGTAGCCAGCACCAGGTCCGAGTGGAGATTGAATCTCTTTTTGATGGAGTAGACCTCTCTGAGCCACTGACCAGAGCTCGATTTGAAGAGCTCAACAATGACTTGTTCAGAAAGACCATGGGACCCGTGAAGAAGGCAATGGACGATGCTGGGTTGGAGAAGAACCAAATTGATGAGATTGTCCTTGTTGGTGGAAGTACCAGGATTCCAAAGGTCCAACAACTTCTAAAGGATTACTTTGATGGCAAAGAACCCAACAAGGGTGTGAATCCAGACGAAGCAGTTGCTTATGGTGCTGCTGTACAAGGAAGCATCTTAAGTGGAGAAGGTGGTGATGAGACTAAAGATATTCTGCTCCTAGATGTTGCCCCACTTACCCTTGGAATTGAAACCGTTGGAGGAGTGATGACCAAGTTGATCCCCAGAAACACTGTTATTCCCACAAAGAAATCCCAAGTTTTCACCACTTACCAGGATCAGCAGACTACTGTCTCCATTCAGGTCTTTGAGGGTGAACGGAGTCTCACAAAGGACTGTAGGAATCTCGGAAAATTTGACTTAAGCGGAATCCCACCAGCCCCAAGAGGAACCCCTCAAATAGAAGTCACGTTTGAACTAGATGCAAACGGAATCTTAAACGTCAAGGCAGAAGACAAGGGCACAGGAAAATCTGAGAAAATCACGATCACAAATGACAAGGGCCGATTGAGCCAGGAGGAGATTGAACGGATGGTGAAAGAAGCAGAAGAGTTTGCGGAGGAAGATAAGAAGGTGAAAGAGAGGATTGATGCTCGTAATAGCCTTGAGACCTATGTCTACAACATGAAGAACCAGGTCAATGACAAGGACAAGCTTGCTGACAAGCTCGAGTCAGATGAGAAGGAGAAGATAGAGACTGCAGTTAAAGAAGCTCTTGAATGGTTGGATGATAATCAGACCTCTGAGAAAGAGGATTATGAGGAGAAGCTCAAGGAGGTGGAAGCTGTGTGTAATCCGATCATCACCGCGGTCTATCAGCGATCTGGTGGAGCTCCAGGCGGTGGAGCTGGTGAGTCGGGAGAAGATGATGATTCTCATGACGAGCTTTGA 2001 45.48 MAGSWRPSLILPAIVFFGFLFAFSIAKEEATKLGTVIGIDLGTTYSCVGVYKNGHVEIIANDQGNRITPSWVAFTDSERLIGEAAKNQAAVNPERTIFDVKRLIGRKFEDKEVQRDMKLVPFKIVNRDGKPYIQVKIKDGETKVFSPEEVSAMILTKMKETAEAFLGKKIKDAVVTVPAYFNDAQRQATKDAGVIAGLNVARIINEPTAAAIAYGLDKKGGEKNILVFDLGGGTFDVSILTIDNGVFEVLATHGDTHLGGEDFDQRIMEYFIKLIKKKHGKDISKDNRALGKLRREAERAKRALSSQHQVRVEIESLFDGVDLSEPLTRARFEELNNDLFRKTMGPVKKAMDDAGLEKNQIDEIVLVGGSTRIPKVQQLLKDYFDGKEPNKGVNPDEAVAYGAAVQGSILSGEGGDETKDILLLDVAPLTLGIETVGGVMTKLIPRNTVIPTKKSQVFTTYQDQQTTVSIQVFEGERSLTKDCRNLGKFDLSGIPPAPRGTPQIEVTFELDANGILNVKAEDKGTGKSEKITITNDKGRLSQEEIERMVKEAEEFAEEDKKVKERIDARNSLETYVYNMKNQVNDKDKLADKLESDEKEKIETAVKEALEWLDDNQTSEKEDYEEKLKEVEAVCNPIITAVYQRSGGAPGGGAGESGEDDDSHDEL 666
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
12 5240009 5244226 - Conep12aG0061500.1 Cone12ag0594 449438
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cone12ag0594 666 Gene3D - 219 393 - -
Cone12ag0594 666 Coils Coil 545 565 - -
Cone12ag0594 666 SUPERFAMILY Actin-like ATPase domain 34 218 IPR043129 -
Cone12ag0594 666 Pfam Hsp70 protein 36 643 IPR013126 GO:0005524(InterPro)|GO:0140662(InterPro)
Cone12ag0594 666 SUPERFAMILY Heat shock protein 70kD (HSP70), peptide-binding domain 417 573 IPR029047 -
Cone12ag0594 666 Gene3D Substrate Binding Domain Of DNAk; Chain A, domain 1 415 569 IPR029047 -
Cone12ag0594 666 Gene3D - 37 408 - -
Cone12ag0594 666 SUPERFAMILY Heat shock protein 70kD (HSP70), C-terminal subdomain 567 650 IPR029048 -
Cone12ag0594 666 Gene3D Actin; Chain A, domain 4 259 342 - -
Cone12ag0594 666 FunFam Heat shock protein 70 37 228 - -
Cone12ag0594 666 ProSitePatterns Heat shock hsp70 proteins family signature 2. 227 240 IPR018181 -
Cone12ag0594 666 MobiDBLite consensus disorder prediction 642 666 - -
Cone12ag0594 666 Coils Coil 283 303 - -
Cone12ag0594 666 Coils Coil 613 633 - -
Cone12ag0594 666 PANTHER HSC70CB, ISOFORM G-RELATED 34 645 IPR050451 GO:0005634(PANTHER)|GO:0005829(PANTHER)|GO:0006457(PANTHER)
Cone12ag0594 666 FunFam heat shock 70 kDa protein-like 98 153 - -
Cone12ag0594 666 CDD HSPA5-like_NBD 34 408 IPR042050 -
Cone12ag0594 666 FunFam Endoplasmic reticulum chaperone BiP 259 342 - -
Cone12ag0594 666 ProSitePatterns Heat shock hsp70 proteins family signature 3. 364 378 IPR018181 -
Cone12ag0594 666 ProSitePatterns Heat shock hsp70 proteins family signature 1. 39 46 IPR018181 -
Cone12ag0594 666 Coils Coil 579 599 - -
Cone12ag0594 666 PRINTS 70kDa heat shock protein signature 361 377 - -
Cone12ag0594 666 PRINTS 70kDa heat shock protein signature 393 413 - -
Cone12ag0594 666 PRINTS 70kDa heat shock protein signature 233 243 - -
Cone12ag0594 666 PRINTS 70kDa heat shock protein signature 501 517 - -
Cone12ag0594 666 PRINTS 70kDa heat shock protein signature 420 439 - -
Cone12ag0594 666 PRINTS 70kDa heat shock protein signature 35 48 - -
Cone12ag0594 666 PRINTS 70kDa heat shock protein signature 63 75 - -
Cone12ag0594 666 PRINTS 70kDa heat shock protein signature 85 93 - -
Cone12ag0594 666 PRINTS 70kDa heat shock protein signature 173 193 - -
Cone12ag0594 666 SUPERFAMILY Actin-like ATPase domain 221 412 IPR043129 -
Cone12ag0594 666 Gene3D - 570 644 IPR029048 -
Cone12ag0594 666 FunFam Heat shock 70 kDa 415 569 - -
Cone12ag0594 666 FunFam Luminal-binding protein 5 569 644 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cone12ag0594 Cone-Chr12:5240009 Cone5ag0040 Cone-Chr5:217216 0 dispersed
Cone12ag0594 Cone-Chr12:5240009 Cone8ag0609 Cone-Chr8:5761574 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cone12ag0594 K09490 - mdm:103452588 1196.03