Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Cone12ag0599 | ATGGAGCTTATGATCAATTCATTAAGCTTAGCTCTTGCCATATTGATAATAATATCTATTTTTAGTTTTGGACTTCTGAAGAGAGTAAACGATTGGTATTATGGTGCGAAGCTCGGAAATGCTTATTCTACTCTCCCTCCTGGCGATATGGGATGGCCTATTCTTGGTTGCTCTATCCCTATCTATAGAGCTCTCACGAAGGCCGGCCCCGATTCTTTTGTTGACAATCTTGTTTCCAAGTATGGTAAAGTTGATATGTTCAAGACCCACCTGTTTGGGTCTCCAGGTGTTATAGTTTGGACTTCAGAGATATGTCGTCAAGTGCTGATGGATGATGAAAGTTTTATGCCAGGAGCCCCCACTTCCATAAGACTGATTTCCGGACGTAAATCGTTAATCAATGTTACAAAATCGGAGCACAAGCGTCTCCGGCATATGACAGCAGCTCCGGTCAGTGGCCATGAATCACTAGCCATGTACATCGATCATATAGAGCATCTCGTGATTAATGGCTTGGAAGAATGGGCCAGTATGAAGGAACCTATTGAGTTCTTGACAGAGGTGAACAAATTAACCTTCAAGATTATTTGGAATATATTCATGGGCTCTACTTCTTATGAGTCTTCATCCTCAGAATCATTTGAGAAGTTATATAGTACTGCGTTTAGAGGATTGTTATCGTTGCCGATCAACATCCCGGGTTTCAATTTTCACAAATCATTGGTGGCGCGAAAAAAAATAGCGACAGTTCTTCAATCCATCATTGATAGAAAACGCTTATCAATTGAAAAAGATGAAGGAAAGCAAAAGAAGGACATGATGGATTTACTGATGGAAGTGGAGGATGAAGATGGTAAGAAATTGGAGGATGAATGTATCATCGATTTGATTTTTGGATACTTAGTAGCAGGTCATGAAACTTCTGCAAGTGCTACGATGTGGACAGTTATTTGTCTAATGGATCATCCACAAATATATAGTAAAGCAAAGGAAGAACAAGAGAATATTATTAAGAAAAGACCGTCCACTCAAAAAGGATTGAATCTTCAAGAAATAAGACAAATGAAATATCTTTCACAGGTAATTGATGAGACACTACGCAACGTGGGTCTTGCATTCATAGGATCATTCCGTGAAGCAAAAGTAGATGTGCAAATTAAGGGATATACCATACCCAAAGGGTGGAAAGTTTACATCTGGACGAGAGCAGTTCATATGGATCCACAGCACTTTCCGAATCCAACAGAATTTGATCCTTCAAGATGGGATAACTTTAGACCAAAACCAGGGGCTTTCATTCCTTTTGGAGGAGGAAGCAGGCTTTGTCCAGGAAGTGATCTTGCAAAGCTTGAGATTTCTATTTTTCTACATTATTTTCTCCTTCATTACAAGCTTGAACGACTCAATCCAAATTGCCCCATAACTTACTTGCCAGCTCGACACCCTGCAGACAACTGCCTCGCAAATATTATCAGAGTTGAATGA | 1485 | 39.87 | MELMINSLSLALAILIIISIFSFGLLKRVNDWYYGAKLGNAYSTLPPGDMGWPILGCSIPIYRALTKAGPDSFVDNLVSKYGKVDMFKTHLFGSPGVIVWTSEICRQVLMDDESFMPGAPTSIRLISGRKSLINVTKSEHKRLRHMTAAPVSGHESLAMYIDHIEHLVINGLEEWASMKEPIEFLTEVNKLTFKIIWNIFMGSTSYESSSSESFEKLYSTAFRGLLSLPINIPGFNFHKSLVARKKIATVLQSIIDRKRLSIEKDEGKQKKDMMDLLMEVEDEDGKKLEDECIIDLIFGYLVAGHETSASATMWTVICLMDHPQIYSKAKEEQENIIKKRPSTQKGLNLQEIRQMKYLSQVIDETLRNVGLAFIGSFREAKVDVQIKGYTIPKGWKVYIWTRAVHMDPQHFPNPTEFDPSRWDNFRPKPGAFIPFGGGSRLCPGSDLAKLEISIFLHYFLLHYKLERLNPNCPITYLPARHPADNCLANIIRVE | 494 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 12 | 5311371 | 5314347 | + | Conep12aG0062000.1 | Cone12ag0599 | 449443 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Cone12ag0599 | 494 | PANTHER | CYTOCHROME P450 26 | 44 | 468 | - | GO:0004497(PANTHER)|GO:0005783(PANTHER)|GO:0016125(PANTHER)|GO:0016491(PANTHER)|GO:0051777(PANTHER) | |
| Cone12ag0599 | 494 | Pfam | Cytochrome P450 | 46 | 468 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cone12ag0599 | 494 | SUPERFAMILY | Cytochrome P450 | 45 | 483 | IPR036396 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cone12ag0599 | 494 | PRINTS | E-class P450 group I signature | 292 | 309 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cone12ag0599 | 494 | PRINTS | E-class P450 group I signature | 312 | 338 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cone12ag0599 | 494 | PRINTS | E-class P450 group I signature | 400 | 424 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cone12ag0599 | 494 | PRINTS | E-class P450 group I signature | 432 | 442 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cone12ag0599 | 494 | PRINTS | E-class P450 group I signature | 442 | 465 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cone12ag0599 | 494 | PRINTS | P450 superfamily signature | 303 | 320 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cone12ag0599 | 494 | PRINTS | P450 superfamily signature | 433 | 442 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cone12ag0599 | 494 | PRINTS | P450 superfamily signature | 442 | 453 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cone12ag0599 | 494 | PRINTS | P450 superfamily signature | 360 | 371 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cone12ag0599 | 494 | Gene3D | Cytochrome P450 | 38 | 492 | IPR036396 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cone12ag0599 | 494 | ProSitePatterns | Cytochrome P450 cysteine heme-iron ligand signature. | 435 | 444 | IPR017972 | GO:0005506(InterPro)|GO:0016705(InterPro) | |
| Cone12ag0599 | 494 | CDD | CYP90-like | 78 | 494 | - | - |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Cone12ag0599 | Cone-Chr12:5311371 | Cone15ag0298 | Cone-Chr15:1388286 | 3.67E-147 | dispersed | |
| Cone12ag0599 | Cone-Chr12:5311371 | Cone14ag0278 | Cone-Chr14:1274806 | 2.22E-169 | transposed | |
| Cone12ag0599 | Cone-Chr12:5311371 | Cone4ag0461 | Cone-Chr4:2046340 | 1.32E-169 | transposed |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Cone12ag0599 | K04123 | - | csv:101208903 | 574.704 |