Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Cone12ag0620 | ATGTTTCTTAGTCAATGGCCTTTTGTTTTTGTTTATTTGTTCTTTCTTCTTCCTCCTCGTCTTTGTTTTTGTCAATCTTCTACTAACAATTCCCCTCAAAACTTCGAAACCTTTTACCCATTTCCAACTCCATCGCCACCCTTTTCGCCGCCGCTATCGCCGCCGCCTGCACAACCACCGCCATCTAAATCATCGTCTGAGAAAACCATTTTGACTGCAGTGGCTGCTACTGCAGCTGCCACGGTCGTGCTTTCTTTGATCATCTTTCTTTTAATCCGACGCTGTCTGGTTGCAGAAAGAAAAAGAAAGCAAGATGGCGGCGGTGGTAGACAGAGAAGTCAGGCTACGGCGGCGGTGGCTCCGCAGAATGGTTTTGGAGATGATAGGAGTGTTGTTGATGAAGATGGTTTGGATGTTATTTATTGGAGAAAACTCGAGGCGAGAAAGTCAAACAATAGTTTTAGCAGAAAGGGATTTCAAGGTTTGAAAAATAAAGTAGAAGAAAGAGAAGAAGAAGAAGAAAAAATGGTGATTGAAAATGGAGGTGGTGAAAGAAAATCCGAGCATGTACAGGAAATCCCTCTTCTCCGTGGGAGATCTTCAACTTCCCATGTCAAAATCGTCCCAGAAACTGAAAACCTAAGGCAAATCACTCATCCACCACCAGCTCCGCTGCCGCTACCTCCGCCGCAGACGGCGGAGGCGCCAACTCAAGTCCCTCCTTCACAGCCCTTTTTAGCACTTGGTAACAATAGCAAACGCCCGGATCCACCTCCAGGACCTCCACCTGCAAACCTAGGGAAGAGAAATAATCCGGCACCACCACCTCCTCCGCCAGTTTTGGCACGGGGGTCGAAGTTGCCAGCGAAGGTTCCACCGGTACCGAAACTTCCAGCCCAGGGGGGTAGAACGGGAGAGTCCTCTTCACCTGGGAAAGAAAAGAATGGTCAAGTTAAGATGAAGCCACTGCATTGGGATAAAGTGAATACTACTAATGCCGAGCACTCCATGGTATGGGACAAAATTGATGGAGGTTCCTTCAGGTTTGATGGTGACCTTATGGAAGCTCTTTTCGGATATGTTGCTACAAACCGATCCCCTCAGAGACCCGAAAACTCAAAGAATTCAACCAGTTTTGATTCATCTTCAAATTCACAAACATTTATACTTGATTCTAGAAAGTCCCAAAACATTGCAATTGTCGTAAAAACGCTTGCCATTTCCAAAAACGAACTCATTGATACACTGATGTCAGGACAGGGCCTAGAAACCGATATTCTCGAAAGGCTCGATAGAATCGCTCCAACTAAAGAGGAACAATCGGAAATCCTCAAATTCAATGGAGACCCATCAAAACTAGCTGATGCAGAATCCTTCCTCTTCAACCTCCTACAGGCTGTTCCAACAGCTTTTACCCGTCTCAAAGCCATGCTTTTCCGATCAAATTACTACCCAGAAATTCTGCTCCTCAAGGAAGATCTACAAACTCTAGAACTCGGATGCAAAGAGCTTAAAACCCGAACGCTCCTTACAAAACTCCTAGAAGCCATACTTAAAGCCGGAAATCGCATGAATGCTGGGACTTCAAGAGGAAATGCTCAAGCTTTCAATCTCAGCGCTCTCCGGAAGCTATCAGATGTCAGAAGTACAGAAGGGAAAACAACTCTACTTCACTTTGTTGTAGAAGAAGTGGTCCGATCTGAAGGGAAAAAGTGTGCTTTAAACCGAAAGAATAACTCAAGCAATAACAACAGCGTATTAATTAGCGAGAGTTTGAATTCAAAAGAAGAAAGGCTGAGGGAGTATATGATGTTAGGGCTGCCAATTGTAGGAGGATTGAGCTTGGAATTTTCTAACGTAAAGAAAGCTGCCTCGATTGATTATAATTCCTTTGTTGGGATATGTCCGGCTCTAGCTTCTAGAATTTTGGAAATTCGAAAACTAGTGGCACAATGTGTGGATGATGAAGGAGGCGGGTTTGCAAGGGGAATGATGGGTTTTATTGAAGTAGCTGAAAATGAAGTAAAAGTGGTGAAGGAGGAGCAGAATAGGGTTTTGGAGACTCTGAAGAAAACAATTGAATTTTATCAAGGGGGAGCTTCAATTGATAAAGGGGGGAACCTGCTTCAGTTATTTGTTATAGTGAAAGATTTTCTAGGCATGGTTGATCAAGCTTGTGTGGAAATTTCTCGGAATGTTCAAAGGAGGAAGAGATCGACAGGTAGGAGTTGGGATCCATCTTCATCTCCAAGATTGGAACCCTTCAAAAGGGTGTTTCCGAACTTGCCGGAAAATTTCATGTCAGAAAAGTCGAGGAGCAGTTCTAGTGAGTCAGATGGTGAGAGTTAA | 2349 | 44.23 | MFLSQWPFVFVYLFFLLPPRLCFCQSSTNNSPQNFETFYPFPTPSPPFSPPLSPPPAQPPPSKSSSEKTILTAVAATAAATVVLSLIIFLLIRRCLVAERKRKQDGGGGRQRSQATAAVAPQNGFGDDRSVVDEDGLDVIYWRKLEARKSNNSFSRKGFQGLKNKVEEREEEEEKMVIENGGGERKSEHVQEIPLLRGRSSTSHVKIVPETENLRQITHPPPAPLPLPPPQTAEAPTQVPPSQPFLALGNNSKRPDPPPGPPPANLGKRNNPAPPPPPPVLARGSKLPAKVPPVPKLPAQGGRTGESSSPGKEKNGQVKMKPLHWDKVNTTNAEHSMVWDKIDGGSFRFDGDLMEALFGYVATNRSPQRPENSKNSTSFDSSSNSQTFILDSRKSQNIAIVVKTLAISKNELIDTLMSGQGLETDILERLDRIAPTKEEQSEILKFNGDPSKLADAESFLFNLLQAVPTAFTRLKAMLFRSNYYPEILLLKEDLQTLELGCKELKTRTLLTKLLEAILKAGNRMNAGTSRGNAQAFNLSALRKLSDVRSTEGKTTLLHFVVEEVVRSEGKKCALNRKNNSSNNNSVLISESLNSKEERLREYMMLGLPIVGGLSLEFSNVKKAASIDYNSFVGICPALASRILEIRKLVAQCVDDEGGGFARGMMGFIEVAENEVKVVKEEQNRVLETLKKTIEFYQGGASIDKGGNLLQLFVIVKDFLGMVDQACVEISRNVQRRKRSTGRSWDPSSSPRLEPFKRVFPNLPENFMSEKSRSSSSESDGES | 782 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 12 | 5572509 | 5575647 | - | Conep12aG0064100.1 | Cone12ag0620 | 449464 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Cone12ag0620 | 782 | MobiDBLite | consensus disorder prediction | 219 | 237 | - | - | |
| Cone12ag0620 | 782 | MobiDBLite | consensus disorder prediction | 254 | 283 | - | - | |
| Cone12ag0620 | 782 | MobiDBLite | consensus disorder prediction | 46 | 62 | - | - | |
| Cone12ag0620 | 782 | ProSiteProfiles | Formin homology-2 (FH2) domain profile. | 310 | 748 | IPR015425 | - | |
| Cone12ag0620 | 782 | MobiDBLite | consensus disorder prediction | 737 | 782 | - | - | |
| Cone12ag0620 | 782 | MobiDBLite | consensus disorder prediction | 46 | 65 | - | - | |
| Cone12ag0620 | 782 | MobiDBLite | consensus disorder prediction | 364 | 385 | - | - | |
| Cone12ag0620 | 782 | MobiDBLite | consensus disorder prediction | 365 | 385 | - | - | |
| Cone12ag0620 | 782 | Coils | Coil | 668 | 688 | - | - | |
| Cone12ag0620 | 782 | MobiDBLite | consensus disorder prediction | 162 | 193 | - | - | |
| Cone12ag0620 | 782 | MobiDBLite | consensus disorder prediction | 162 | 321 | - | - | |
| Cone12ag0620 | 782 | Gene3D | Formin, FH2 domain | 330 | 744 | IPR042201 | - | |
| Cone12ag0620 | 782 | SUPERFAMILY | Formin homology 2 domain (FH2 domain) | 323 | 737 | - | - | |
| Cone12ag0620 | 782 | SMART | it6_source | 310 | 737 | IPR015425 | - | |
| Cone12ag0620 | 782 | Pfam | Formin Homology 2 Domain | 312 | 722 | IPR015425 | - | |
| Cone12ag0620 | 782 | MobiDBLite | consensus disorder prediction | 102 | 130 | - | - | |
| Cone12ag0620 | 782 | PANTHER | FORMIN-RELATED | 31 | 776 | IPR027643 | GO:0003779(InterPro)|GO:0030036(InterPro)|GO:0045010(InterPro)|GO:0051015(InterPro) |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Cone12ag0620 | Cone-Chr12:5572509 | Cone9ag0106 | Cone-Chr9:462691 | 5.02E-86 | dispersed | |
| Cone12ag0620 | Cone-Chr12:5572509 | Cone8ag0638 | Cone-Chr8:6278951 | 0 | wgd |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Cone12ag0620 | K28090 | - | mdm:103403306 | 646.351 |