Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cone12ag0621 | ATGGCGAGGAACGGTGGCGGTTCGTGGCGACGGAGGGCGGAGAAGATTGAGGATTTCGTCGAACACTTGCCCCCGCCGCTGCTGACGTCTGATTCTGAACAAGTTCATGTTCTTGCTGTTGATGATAGTCTCGTCGATCGAAAGTGCATCGAGCGCTTGCTCAAGATTTCTTCCTGTAAAGTTACCGCCGTAGATAGTGGAAGAAGAGCATTGCAATACCTTGGCTTGGACGGGGATCAGAGAAGCTCCTCTGTTCGATTTGATAAAATGAAGGTCGATATGATCATAACCGATTACTGTATGCCTGGAATGACAGGCTACGAATTGCTCAAGAAAATCAAGGAATCATCGACTTTCAGAGAAATTCCAGTTGTGATTATGTCCTCAGAAAACGTATTAGCAAGAATAAGCAGGTGCTTAGAAAATGGAGCAGAAGATTTCATAGTGAAGCCAGTGCAGTTATCAGATGTGAGAAGGCTCACGGATTATATGATGAGGGAGATTAAAGTAGGAGACGGTGAGGAAAGGAAGATAACGAAGAGAAAGTTCAGGGAAGATTCTGGTTGCGATCTGGCTTCATCATCTCCGTCCATTTCTTCGTCAAGACCATCATCGCCTACTTTTGGAGATTTGGTTGGCAAGATATAG | 648 | 45.37 | MARNGGGSWRRRAEKIEDFVEHLPPPLLTSDSEQVHVLAVDDSLVDRKCIERLLKISSCKVTAVDSGRRALQYLGLDGDQRSSSVRFDKMKVDMIITDYCMPGMTGYELLKKIKESSTFREIPVVIMSSENVLARISRCLENGAEDFIVKPVQLSDVRRLTDYMMREIKVGDGEERKITKRKFREDSGCDLASSSPSISSSRPSSPTFGDLVGKI | 215 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
12 | 5585406 | 5586871 | - | Conep12aG0064200.1 | Cone12ag0621 | 449465 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cone12ag0621 | 215 | MobiDBLite | consensus disorder prediction | 187 | 215 | - | - | |
Cone12ag0621 | 215 | PANTHER | TWO-COMPONENT RESPONSE REGULATOR | 31 | 197 | IPR045279 | GO:0009736(InterPro) | |
Cone12ag0621 | 215 | SMART | REC_2 | 35 | 161 | IPR001789 | GO:0000160(InterPro) | |
Cone12ag0621 | 215 | CDD | REC_typeA_ARR | 37 | 160 | - | - | |
Cone12ag0621 | 215 | ProSiteProfiles | Response regulatory domain profile. | 36 | 165 | IPR001789 | GO:0000160(InterPro) | |
Cone12ag0621 | 215 | MobiDBLite | consensus disorder prediction | 190 | 207 | - | - | |
Cone12ag0621 | 215 | SUPERFAMILY | CheY-like | 34 | 167 | IPR011006 | - | |
Cone12ag0621 | 215 | Pfam | Response regulator receiver domain | 37 | 158 | IPR001789 | GO:0000160(InterPro) | |
Cone12ag0621 | 215 | Gene3D | - | 35 | 195 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cone12ag0621 | Cone-Chr12:5585406 | Cone13ag0617 | Cone-Chr13:6253790 | 7.14E-55 | dispersed | |
Cone12ag0621 | Cone-Chr12:5585406 | Cone13ag0113 | Cone-Chr13:685989 | 1.41E-62 | wgd | |
Cone12ag0621 | Cone-Chr12:5585406 | Cone19ag0116 | Cone-Chr19:655317 | 1.56E-64 | wgd | |
Cone12ag0621 | Cone-Chr12:5585406 | Cone8ag0639 | Cone-Chr8:6286505 | 4.33E-127 | wgd |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
44464 | PF01546 | Peptidase_M20 | 1.10E-27 | CL0035 | Cone | TR |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cone12ag0621 | K14492 | - | mdm:103451909 | 251.521 |