Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cone12ag0659 ATGAAGTCCTTATACCTCTTCGATCCTCACCTCATCACCCTCTTCTTCTTATGTTTCTTCTTCGACAAATCCCACACCGACCCACGAGCCACAGAAGCAGCTCTTATATGCACAAACAGTACCGCTTCAGCCCCTCTTCGCCAGATCTTCATCGCAAACTTCTTAGCCACCATGGACGCACTGACACCACTAATCGCTGCAAACAGATATGGCGCCGTAATAAACGGGACAGGAAACGCCACCGTTTACGCTTTCGGCGAGTGCATGAGAGACCTCTCGCAGCAAGACTGCAACCTCTGCATCGCCCAATGCAAGACCCAGATCCTCCGCTGCCTCCCGTTCCAGCTCCTAGTTCGCGGCGGTCGACTCTTCTACGACGGTTGCTATCTTCGCTACGATGATTATGATTTCTTCAACGAGTCTTTTAGTTTAGTGGACAAGACTGTTTGTGGGGGGGAAAATTTTGGCGGCAATTTGAAAGTTTTTAATGGGAACGTGATGAATTTGGTTATGAATTTGAGTTTAGAAGCGGGAAAGAGCGACGGTTTTTCAGTTTCCTCGGTGGATTATGCAAATGCGACGGTCTTTGGATTGGGGCAGTGCTGGAAATTTATAAGAGGGAGTAGTTGTTCGAATTGCTTGAATGATGCGGTTAAGAAGATTGATTCTTGCCCTCCGAAGCAAGAAGGGAGAGCCTTGAATTCTGGTTGCTATTTGAGGTATTCTAGGGAGAGGTTTTACTATAACAATACTGATTCCAGTTCATCTTCTGGAAATGGAGGACGGAGCCGGTTAGCAATTATACTCTCTTCGGTATGTGCTGCAGTGGCAGTTATCGTAATTATTGGAACTATTGCTTTCTTTGCAAGGAAGAGAGTGTTGAAGAAAAAGAGAGAGAGAAAGCAACTAGGTGCTCTTATAGCCACAGTAAATAAGTCCAAGCTCAATTTCTCATATGAAGTTCTAGAGAGAGCAACGCGTTACTTTGACAATTCCAATAAGCTTGGACAAGGTGGTTCTGGTTCTGTCTATAAAGGAGTATTACCGGATGGGAAAGTAGTAGCGATCAAGAGGCTTTTCTTCAACTCAAGACAATGGGTTGACCATTTCTTTAACGAAGTCAACTTAATCAGTAACATAGACCACAAAAATCTCGTAAAGCTTCTAGGATGTAGCATAACTGGCCCAGAAAGCCTTCTTGTTTATGAATATGTCCCGAATCAAAGCCTCCATGATTACCTTACTGCTGAAAAGTATCGGCCACTTAGTTGGGAGGAGCGCTATAAGATTATATTGGGTACTGCTGAAGGATTGGCTTATCTTCACGAAGAATCGGAAGTTAGAATCATACATAGAGATATAAAATTAAGCAACATTCTTCTTGAGGATGATTTCACTCCGAAAATTGCTGATTTTGGGCTCGCTCGATTATTTCCAGAAGATAAGACACATATTAGCACTGCAATTGCCGGAACCTTAGGATATATGGCTCCAGAATATGTGGTTCGGGGAAAGTTGTCTGAAAAGGCAGACACTTACAGTTTTGGAGTTATGGTCACTGAAGTAGTAACTGGAAAGAAGAACAATTACTTCTCTCAAGATAGATTCTCAATCTTACAAATGGTTTGGAATCTATACGGATTGAGGAATCTTTGTGAAGCTGTTGATCCAATCCTTGACGGTAACTTTCAAGAAGAGGAGGCTTCTAGGTTACTTCAAATCGGGCTTCTTTGTGTACAAGCCTCAGCTGATCTAAGACCGGCAATGTCAATGGTTGTTAAAATGGTTAATGGAAATATTGAGATTCCTCAGCCAACTCAACCTCCTTTTCTCAATTCGACTGGTTCTGCTGAGATGTTTCGGGCCCACATTCACTCGGGAAATTCCAAATCTATCCCAAATTCGAACACACAATCTTCAGGGAATGACTTGACTCAAAGCTGGATTGAGCCAAGATGA 1959 43.08 MKSLYLFDPHLITLFFLCFFFDKSHTDPRATEAALICTNSTASAPLRQIFIANFLATMDALTPLIAANRYGAVINGTGNATVYAFGECMRDLSQQDCNLCIAQCKTQILRCLPFQLLVRGGRLFYDGCYLRYDDYDFFNESFSLVDKTVCGGENFGGNLKVFNGNVMNLVMNLSLEAGKSDGFSVSSVDYANATVFGLGQCWKFIRGSSCSNCLNDAVKKIDSCPPKQEGRALNSGCYLRYSRERFYYNNTDSSSSSGNGGRSRLAIILSSVCAAVAVIVIIGTIAFFARKRVLKKKRERKQLGALIATVNKSKLNFSYEVLERATRYFDNSNKLGQGGSGSVYKGVLPDGKVVAIKRLFFNSRQWVDHFFNEVNLISNIDHKNLVKLLGCSITGPESLLVYEYVPNQSLHDYLTAEKYRPLSWEERYKIILGTAEGLAYLHEESEVRIIHRDIKLSNILLEDDFTPKIADFGLARLFPEDKTHISTAIAGTLGYMAPEYVVRGKLSEKADTYSFGVMVTEVVTGKKNNYFSQDRFSILQMVWNLYGLRNLCEAVDPILDGNFQEEEASRLLQIGLLCVQASADLRPAMSMVVKMVNGNIEIPQPTQPPFLNSTGSAEMFRAHIHSGNSKSIPNSNTQSSGNDLTQSWIEPR 652
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
12 6043620 6046904 - Conep12aG0068200.1 Cone12ag0659 449503
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cone12ag0659 652 SUPERFAMILY Protein kinase-like (PK-like) 315 616 IPR011009 -
Cone12ag0659 652 FunFam Cysteine-rich receptor-like protein kinase 3 146 246 - -
Cone12ag0659 652 ProSiteProfiles Gnk2-homologous domain profile. 31 137 IPR002902 -
Cone12ag0659 652 MobiDBLite consensus disorder prediction 626 652 - -
Cone12ag0659 652 Pfam Protein kinase domain 330 551 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cone12ag0659 652 SMART serkin_6 329 589 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cone12ag0659 652 ProSiteProfiles Protein kinase domain profile. 329 611 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cone12ag0659 652 FunFam Cysteine-rich receptor-like protein kinase 2 405 604 - -
Cone12ag0659 652 PANTHER CYSTEINE-RICH RECEPTOR-LIKE PROTEIN KINASE 3 185 632 IPR052059 GO:0004674(PANTHER)|GO:0006468(PANTHER)
Cone12ag0659 652 MobiDBLite consensus disorder prediction 627 652 - -
Cone12ag0659 652 Gene3D - 31 137 IPR038408 -
Cone12ag0659 652 Gene3D - 144 246 IPR038408 -
Cone12ag0659 652 FunFam Cysteine-rich receptor-like protein kinase 2 295 404 - -
Cone12ag0659 652 ProSitePatterns Protein kinases ATP-binding region signature. 335 357 IPR017441 GO:0005524(InterPro)
Cone12ag0659 652 CDD STKc_IRAK 335 598 - -
Cone12ag0659 652 ProSitePatterns Serine/Threonine protein kinases active-site signature. 449 461 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Cone12ag0659 652 Pfam Salt stress response/antifungal 37 135 IPR002902 -
Cone12ag0659 652 Pfam Salt stress response/antifungal 154 243 IPR002902 -
Cone12ag0659 652 Gene3D Transferase(Phosphotransferase) domain 1 405 604 - -
Cone12ag0659 652 FunFam Cysteine-rich receptor-like protein kinase 2 30 137 - -
Cone12ag0659 652 ProSiteProfiles Gnk2-homologous domain profile. 143 246 IPR002902 -
Cone12ag0659 652 Gene3D Phosphorylase Kinase; domain 1 289 404 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cone12ag0659 Cone-Chr12:6043620 Cone8ag0680 Cone-Chr8:6804886 0 dispersed
Cone1ag1673 Cone-Chr1:57879922 Cone12ag0659 Cone-Chr12:6043620 5.33E-57 dispersed
Cone5ag0917 Cone-Chr5:3924356 Cone12ag0659 Cone-Chr12:6043620 1.55E-56 dispersed
Cone12ag0658 Cone-Chr12:6028821 Cone12ag0659 Cone-Chr12:6043620 2.91E-150 tandem
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
81959 PF02109 DAD 1.30E-24 No_clan Cone PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cone12ag0659 - - - 0.0