Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cone12ag0660 ATGGAAGTTGAAGGCAGTGAAAAACCGACATTCTCTCTCCCAGTTGATTCCGAGCACAAAGCCACCGTGTTCCGCCTCTTCTCCGTCGCATCACCTCATATGCGAGCATTTCACTTATCTTGGTTCTCTTTCCTCTGTTGCTTCGTCTCCAGTTTCGCGATTCCGCCGCTACTTCCCATCATCCGCGACAATCTCAACCTCACTGACACCGACATAGGAAACGCCGGAGTAGCCTCCGTTTCCGGTGCGGTCTTTGCACGTATAGCGATGGGAACTGCTTGCGACCTCTTTGGTCCACGTCTCGCCTCAGCTTCCCTCATCCTCCTCACTTCACCGGCGGTTTACTGCACTTCCCTCGCTAATTCCCCCGCCTCTTTCCTCCTCCTCCGTTTTTTCACCGGCTTCTCTCTAGCCACTTTTGTCTCGACCCAGTTCTGGATGAGCTCCATGTTCTCCGCCAACGTCGTCGGAACGGCCAACGGAATTTCCGGTGGGTGGGGAAACCTCGGCGGCGGAGCTACCCAGCTCCTCATGCCTTATGTTTTCGCCATAATCCGCGACATTGGAGTTACCAAATTCACGGCTTGGCGAATAGCGTTTTTCGTGCCGGGAGTTCTCCAAACGCTGTCTGCCTTCGCCGTTATACTCCTCGGTCAAGACATGCCCGACGGAAATTTCAGCAACCTCCATAAATCCGGCGACAAGCCGAAAGACAAATTTTCTCAGGTTTTTTACCACGGGATTAAGAATTACAGAGGGTGGATTCTATTTTTGACTTATGGGTATTGCTTTGGGGTGGAATTAACAATTGATAACATAATAGCGAATTACTTTTACGATCGGTTTAATTTGAAGTTGGGTACGGCGGGGATTGTGGCAGCGGCATTTGGGCTGGCAAATTTGTTTTCGCGGCCGTATGGTGGGATTTTGTCGGATATGGTGGCTAAGAGGTACGGGATGAGAGGGAGGATTTGGGCTTTGTGGGTGGTCCAGACAATTGGAGGAGTGCTTTGTGTGATTTTGGGCCAAGTGGGGAGTTTAGGGGCTTCCATTGTTGTCATGATTGCTTTCTCTCTGTTTGTTCAAGCGGCTTGTGGGCTTACTTATGGGGTTGTTCCTTTTGTTTCTAGGAGATCATTAGGTGTTATTTCCGGGATGACTGGGGGCGGAGGGAACGCGGGTTCAGTACTAACTCAAGTAATATTTTTCAGAGGATCAAGATATTCAAAAGAAACAGGGATAACCCTAATGGGTATAATGATCATATGTTGTACTCTGCCTCTTTGTTTCATATACTTCCCTCAATGGGGAGGGATGTTTTGTGGGCCTTCTAAAAAGGTTGCTACAGAAGAAGATTACTACCTGTGTGAATGGAGCCCAGAAGAGAAAGAGAAGGGTTACCATCTAGCAAGCATGAAATTTGCTGATAATAGCAGAAAAGAAAGGGGGAAAGCTTCGGGCACTGATGAAACCTCACAAGCCCATGTATAA 1491 48.69 MEVEGSEKPTFSLPVDSEHKATVFRLFSVASPHMRAFHLSWFSFLCCFVSSFAIPPLLPIIRDNLNLTDTDIGNAGVASVSGAVFARIAMGTACDLFGPRLASASLILLTSPAVYCTSLANSPASFLLLRFFTGFSLATFVSTQFWMSSMFSANVVGTANGISGGWGNLGGGATQLLMPYVFAIIRDIGVTKFTAWRIAFFVPGVLQTLSAFAVILLGQDMPDGNFSNLHKSGDKPKDKFSQVFYHGIKNYRGWILFLTYGYCFGVELTIDNIIANYFYDRFNLKLGTAGIVAAAFGLANLFSRPYGGILSDMVAKRYGMRGRIWALWVVQTIGGVLCVILGQVGSLGASIVVMIAFSLFVQAACGLTYGVVPFVSRRSLGVISGMTGGGGNAGSVLTQVIFFRGSRYSKETGITLMGIMIICCTLPLCFIYFPQWGGMFCGPSKKVATEEDYYLCEWSPEEKEKGYHLASMKFADNSRKERGKASGTDETSQAHV 496
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
12 6051670 6053739 - Conep12aG0068300.1 Cone12ag0660 449504
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cone12ag0660 496 PANTHER HIGH-AFFINITY NITRATE TRANSPORTER 2.3 7 484 IPR044772 GO:0005886(PANTHER)|GO:0015112(PANTHER)|GO:0015112(InterPro)|GO:0015706(PANTHER)|GO:0071249(PANTHER)
Cone12ag0660 496 Gene3D MFS general substrate transporter like domains 30 225 IPR036259 -
Cone12ag0660 496 FunFam High affinity nitrate transporter 2.5 29 225 - -
Cone12ag0660 496 MobiDBLite consensus disorder prediction 477 496 - -
Cone12ag0660 496 SUPERFAMILY MFS general substrate transporter 30 432 IPR036259 -
Cone12ag0660 496 FunFam Nitrate transporter 2.1 237 438 - -
Cone12ag0660 496 Gene3D MFS general substrate transporter like domains 237 437 IPR036259 -
Cone12ag0660 496 CDD MFS_NRT2_like 37 430 IPR044772 GO:0015112(InterPro)
Cone12ag0660 496 Pfam Major Facilitator Superfamily 41 397 IPR011701 GO:0022857(InterPro)|GO:0055085(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cone12ag0660 Cone-Chr12:6051670 Cone5ag1250 Cone-Chr5:5884497 4.07E-214 dispersed
Cone12ag0660 Cone-Chr12:6051670 Cone8ag0681 Cone-Chr8:6818916 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cone12ag0660 K02575 - vvi:100260250 792.727