Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Cone12ag0732 | ATGGAATCCCTTACACAATATCTTCAGCAACATCCTTTTTCCATCACTGATCTCCTCGTTACAATCATCCCAACTCTACTCCTCACTGTCATCTTTGCCGGTCTAGTATTCGGATTCCGCAGGAATAAACTACCTTATCCACCCGGGCCTAGAGGCTTACCCATCATAGGCAACATGCTAATGATGGACCAATTAACCCACCGTGGTCTAGCCAAGCTAGCTCGTAGATACGGAGGAATCTTCCACCTACGGATGGGCTTCCTCCACATGGTGGCCATCTCGAGCCCTGACGTGGCTCGTGAGGTCCTCCAAGTTCATGACAACATTTTCTCCAACCGCCCCGCCACTATCGCCATCCGCTACCTCACTTATGATCGAGCTGACATGGCCTTTGCCCACTACGGGCCTTTCTGGCGCCAGATGAGGAAGCTATGTGTTATGAAGCTCTTCAGTCGAAAACGGGCCGAGTCCTGGGAGTCAGTTCGGGACGAGGTGGATTCCACTGTTCGGAAGATCGCCGCCTCCACTGGGACGGCGGTCAATATCGGTGACTCGGTCTTTGAACTAACTAAGAATATTATATATCGGGCTGCTTTCGGATCAACCTCGAAAGAGGGTCAAGACGAATTCATTAGTATCTTGCAAGAGTTTTCAAAGCTTTTTGGAGCTTTTAATATTGCGGATTTTATTCCTTCTCTGGGTTGGATTGATCCACAAGGATTGACTAAAAGACTTGTTGTAGCTCGTCAGTCGCTCGATCGGTTCATTGACAACATCATCGATGATCATGTGCAAAAGAAGATGAACAACAGCAACAAAAACAACAATAGCTCTGAGGATCAAGTACTTGATACTGATATGGTAGATGACTTGCTAGCCTTTTACACTACCGATCAAGATCAGGGAAAAGTAAGCGATTCTGACGATCTACAAACCGCCATCAAACTCACCAAAGATAACATTAAAGCCATCATCATGGACGTGATGTTTGGTGGGACCGAGACGGTAGCGTCGGCAATAGAATGGGCCATGACGGAGTTGATGAGAAGTCCAGAGGATCTAAAGAGGGTCCAACAAGAGCTAGCTGATGTAGTGGGTCTGGACCGAAGAGTGGAAGAGTCCGATATGGAAAAATTGACATTCTTAAAATGTGTTCTAAAAGAAACCCTCCGGCTCCACCCGCCAATCCCTCTCCTCCTCCACGAGACTGCGAAGGACGCGGTGGTTTCCGGCTACTACATCCCGGCGGAGTCACGCGTCATGATAAACGCGTGGGCGATTGGAAGAGACGAGAAGGCGTGGGAAGACGCTGATTCTTTCAAGCCGTCAAGGTTCTTAAAAGACGGCGTGCCGGATTTCAAAGGAAGCAATTTCGAGTTCATACCGTTCGGATCGGGTAGGAGGTCATGTCCGGGAATGGTCCTTGGGCTGTACGCGTTGGAGATGGCTGTTGTGCATTTGGTCCACTGTTTCACGTGGGAATTACCTGATGGAATGAAACCGATTGAGGTGGACGTTAATGACATGTTTGGACTCACTGCACCTAAAGCGACTCGACTCGTTGCTGTACCGAGTAAGAGAGTTATTTGTCCTCTCGTATAA | 1602 | 48.5 | MESLTQYLQQHPFSITDLLVTIIPTLLLTVIFAGLVFGFRRNKLPYPPGPRGLPIIGNMLMMDQLTHRGLAKLARRYGGIFHLRMGFLHMVAISSPDVAREVLQVHDNIFSNRPATIAIRYLTYDRADMAFAHYGPFWRQMRKLCVMKLFSRKRAESWESVRDEVDSTVRKIAASTGTAVNIGDSVFELTKNIIYRAAFGSTSKEGQDEFISILQEFSKLFGAFNIADFIPSLGWIDPQGLTKRLVVARQSLDRFIDNIIDDHVQKKMNNSNKNNNSSEDQVLDTDMVDDLLAFYTTDQDQGKVSDSDDLQTAIKLTKDNIKAIIMDVMFGGTETVASAIEWAMTELMRSPEDLKRVQQELADVVGLDRRVEESDMEKLTFLKCVLKETLRLHPPIPLLLHETAKDAVVSGYYIPAESRVMINAWAIGRDEKAWEDADSFKPSRFLKDGVPDFKGSNFEFIPFGSGRRSCPGMVLGLYALEMAVVHLVHCFTWELPDGMKPIEVDVNDMFGLTAPKATRLVAVPSKRVICPLV | 533 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 12 | 6720642 | 6722522 | - | Conep12aG0075500.1 | Cone12ag0732 | 449576 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Cone12ag0732 | 533 | PRINTS | E-class P450 group I signature | 74 | 93 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cone12ag0732 | 533 | PRINTS | E-class P450 group I signature | 189 | 207 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cone12ag0732 | 533 | PRINTS | E-class P450 group I signature | 98 | 119 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cone12ag0732 | 533 | PRINTS | E-class P450 group I signature | 340 | 366 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cone12ag0732 | 533 | PRINTS | E-class P450 group I signature | 423 | 447 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cone12ag0732 | 533 | PRINTS | E-class P450 group I signature | 383 | 401 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cone12ag0732 | 533 | PRINTS | E-class P450 group I signature | 320 | 337 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cone12ag0732 | 533 | PRINTS | E-class P450 group I signature | 460 | 470 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cone12ag0732 | 533 | PRINTS | E-class P450 group I signature | 470 | 493 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cone12ag0732 | 533 | SUPERFAMILY | Cytochrome P450 | 39 | 527 | IPR036396 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cone12ag0732 | 533 | Gene3D | Cytochrome P450 | 39 | 527 | IPR036396 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cone12ag0732 | 533 | PANTHER | CYTOCHROME P450 84A1-RELATED | 26 | 532 | IPR053062 | GO:0004497(PANTHER) | |
| Cone12ag0732 | 533 | ProSitePatterns | Cytochrome P450 cysteine heme-iron ligand signature. | 463 | 472 | IPR017972 | GO:0005506(InterPro)|GO:0016705(InterPro) | |
| Cone12ag0732 | 533 | FunFam | Cytochrome P450 84A1 | 39 | 526 | - | - | |
| Cone12ag0732 | 533 | Pfam | Cytochrome P450 | 47 | 516 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cone12ag0732 | 533 | CDD | CYP71-like | 76 | 520 | - | - | |
| Cone12ag0732 | 533 | PRINTS | P450 superfamily signature | 461 | 470 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cone12ag0732 | 533 | PRINTS | P450 superfamily signature | 384 | 395 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cone12ag0732 | 533 | PRINTS | P450 superfamily signature | 331 | 348 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Cone12ag0732 | Cone-Chr12:6720642 | Cone9ag1520 | Cone-Chr9:11094177 | 4.85E-118 | dispersed | |
| Cone12ag0732 | Cone-Chr12:6720642 | Cone6ag1596 | Cone-Chr6:12388422 | 4.97E-120 | wgd | |
| Cone12ag0732 | Cone-Chr12:6720642 | Cone8ag0751 | Cone-Chr8:7588980 | 6.16E-52 | wgd | |
| Cone12ag0732 | Cone-Chr12:6720642 | Cone8ag0835 | Cone-Chr8:8371094 | 0 | wgd | |
| Cone12ag0732 | Cone-Chr12:6720642 | Cone9ag1518 | Cone-Chr9:11088097 | 1.68E-18 | wgd |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Cone12ag0732 | K09755 | - | mdm:103400991 | 810.831 |