Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cone12ag0745 | ATGAATTCATCGTCCACCCAATTTGTTGCCGCAAGAAGAATGGAAGTTTATGAACCTATCCACCAGTTTGGCATGTGGGAGGAAAACTTCAAATGTAATAGTAATCTCCACACATCTGCAACCCTGATCATGGAGGCGGACACAAAACTAGATGATCATTCAGATAATGCTTCACTTGGGTCAATGGGACTTCCTCATAAGTATGAGCAAGAAGCAACTAGACCAAATGATAAGACACTAAGAAGGCTTGCACAAAACCGGGAGGCAGCTCGTAAAAGCCGCCAGCGAAAAAAGGCCTATGTTCAGCAATTAGAAAAAAGCCGCTTGAAGCTGGTTCAATTAGAGCAGGAGCTTGAGAAAACAAGACAACAAGGTGTTTATGCTGGCGGTGCATTTGATGCTAATCTGCTGGGATTCTCTGGAGCCATAAATTCAGGTGTGACCACATTTGAGATGGAGTATAGACATTGGGTGGAGAAGCAAAACATGCAGATCAGCGAGCTGAGAACTGCTTTACATGCTGATATATCTGATAGAGAGCTTGACATGCTTGTGAAAAGTTGTTTGGATCATTATTATGACCTTTTCCGATTGAAAGCAATAGCTGCAAAATCCGACGTCTTTTATGTATTATATGGAATGTGGAAAACACCTGTTGAAAGATTTTTCTTCTGGATTGGAGGATTTCGCCCTTCAGAGATCCTTAAGGTTCTCGAGCCTCAGCTTGATACATTGACCGAACAACAACATATAGATGTCAAAAAACTTACACAATCATGTCAGCAAGCAGAAGACGCTCTTCGGCAAGGTATGGACAAACTCCAGCAAACCCTAACTGATAGTATAGTGGCTGGTCGGCTTGGTGATGGAAGTTATCCCATTCAGATGTCTACTGCAATGGAGAGGCTAGAAGCTCTGGTCAGCTTTGTAAATCAGGCAGACAACCTCAGACAGGTAACACTGCAACAGATGAAGAAAATTTTATCGATCCGGCAGTCAGCCCATGGCTTACTAGTACTGGGGGACTACTTCCATAGACTCAGAGCCTTGAGCTTGGTTTGGGCTAATTGTGCAGATCATCAAGGTGTGCCGCTCTGCCTATCGCGTAATATGGTACTGTGA | 1122 | 43.58 | MNSSSTQFVAARRMEVYEPIHQFGMWEENFKCNSNLHTSATLIMEADTKLDDHSDNASLGSMGLPHKYEQEATRPNDKTLRRLAQNREAARKSRQRKKAYVQQLEKSRLKLVQLEQELEKTRQQGVYAGGAFDANLLGFSGAINSGVTTFEMEYRHWVEKQNMQISELRTALHADISDRELDMLVKSCLDHYYDLFRLKAIAAKSDVFYVLYGMWKTPVERFFFWIGGFRPSEILKVLEPQLDTLTEQQHIDVKKLTQSCQQAEDALRQGMDKLQQTLTDSIVAGRLGDGSYPIQMSTAMERLEALVSFVNQADNLRQVTLQQMKKILSIRQSAHGLLVLGDYFHRLRALSLVWANCADHQGVPLCLSRNMVL | 373 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
12 | 6847559 | 6851722 | + | Conep12aG0076800.1 | Cone12ag0745 | 449589 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cone12ag0745 | 373 | CDD | bZIP_HBP1b-like | 78 | 130 | - | - | |
Cone12ag0745 | 373 | ProSiteProfiles | Basic-leucine zipper (bZIP) domain profile. | 76 | 120 | IPR004827 | GO:0003700(InterPro)|GO:0006355(InterPro) | |
Cone12ag0745 | 373 | Coils | Coil | 97 | 124 | - | - | |
Cone12ag0745 | 373 | PANTHER | TRANSCRIPTION FACTOR TGA9 | 1 | 357 | - | - | |
Cone12ag0745 | 373 | Pfam | bZIP transcription factor | 77 | 120 | IPR004827 | GO:0003700(InterPro)|GO:0006355(InterPro) | |
Cone12ag0745 | 373 | SMART | brlzneu | 74 | 138 | IPR004827 | GO:0003700(InterPro)|GO:0006355(InterPro) | |
Cone12ag0745 | 373 | MobiDBLite | consensus disorder prediction | 54 | 73 | - | - | |
Cone12ag0745 | 373 | Coils | Coil | 253 | 273 | - | - | |
Cone12ag0745 | 373 | ProSitePatterns | Basic-leucine zipper (bZIP) domain signature. | 81 | 96 | IPR004827 | GO:0003700(InterPro)|GO:0006355(InterPro) | |
Cone12ag0745 | 373 | ProSiteProfiles | DOG1 domain profile. | 147 | 357 | IPR025422 | GO:0006351(InterPro)|GO:0043565(InterPro) | |
Cone12ag0745 | 373 | Pfam | Seed dormancy control | 164 | 239 | IPR025422 | GO:0006351(InterPro)|GO:0043565(InterPro) | |
Cone12ag0745 | 373 | Gene3D | - | 77 | 126 | - | - | |
Cone12ag0745 | 373 | FunFam | BZIP family transcription factor | 77 | 126 | - | - | |
Cone12ag0745 | 373 | SUPERFAMILY | Leucine zipper domain | 78 | 121 | IPR046347 | GO:0003700(InterPro)|GO:0006355(InterPro) |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cone12ag0745 | Cone-Chr12:6847559 | Cone20ag0480 | Cone-Chr20:2568276 | 3.73E-108 | dispersed | |
Cone12ag0745 | Cone-Chr12:6847559 | Cone8ag0792 | Cone-Chr8:7958365 | 8.72E-235 | wgd |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
44474 | None | None | None | None | Cone | TF |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cone12ag0745 | K14431 | - | mdm:103416129 | 477.248 |