Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cone12ag0754 ATGAGAGTGCCTCCCTTTAATGCTTCTCCACAAACAAACTCATCTCCAAATCCAAAGCTACTAATCAACTCTAACCCTAGAAACAACACCACCTTTCACACAACAAATAATGTAGTTCCAAACTTATCCTACGAGCCTACCTCCGTCCTCGACTTGCGTCGTAGCCCTAGCCCTCCTAAGGCAGAAAAACAGGCTCAAGCTCCGGCTAATGGTGACCAGATTTCTCGATCAGATCATCATAATCAAGAACATAATTCTATCGAGTGGGACGAGCACGTGCCGCATAACCTCGATTGGGATTCAATCCTTAGAGACTTCGGTTTGAATGAAGATATTAACACTCCTGTTTTGATCAAGAACAATATTTCTAGTCTTAATCATAATGATCAAGTTCCACACCTGCCCGAGTTCTTGCCGTCACAGCCGTTGGATCTCGCTCACCTTGTTCATCACTCTGATCATCATAACTTTAACTTATCTGAAGTACTCTATGGCAATAATAGTACTACTACTCTACCGAACAATTTCAATTCCTTGGATCAGTTAATATTATCACCACCGCATGATAGTAATAATATTGGTTTTCACCAGAGCAATCTCAACCGGTTTGAATTCGTAGAAGATATTCTTCGAGCAGCGGATTGTTTCGACTCCAACGAGGTCCAACTGGCCCATACCATACTGGACCGGCTAAATCAACGGCTCCAATATTCTTCGACTGCTAAACCACTTCATAGGGTAGCCTTCTACTTCAAAGAAGCTCTTCAGTATTCACTTGTCTCCAGTTTAAATAACCGGGCCGGTAGTAATACTACTACGTTGACTAGCCATCTTTCTTCCTGGCCTGAAATCGTTGACACGATCCGGGCCCAGAAGGCCTTCTCTGCGATTTCCCCTATCCCCATGTTCTCTCACCTCACCACAAACCAAGCCCTCCTTGAAGCTCTTAACGGCTCACCATTCATCCACGTCATTGATTTCGATATCGGGCTCGGAGGTCAATACGCTTCCTTAATGAAAGAGGTGTCGGAAAAGGCCGAGGCCCGTAAAATGATCAACCCACGGCCAGTTTTGAGAATCAGTGCGATCGTGCCTGAAGAATATGCAACGGAAAGCAGATTGGTAAGAGAAAATCTTCATCAGTTCGCTCAAGAGCTTAAGATAAGATTCCAGATAGATTTCGTTCTTCTTCGGACGTTTGAAACGGTGTCGTTTAAAGCAGTGAAGTTTATGGATGGAGAACAGGTGGCGGTTTTGTTATCGCCGACGATCTTTCGCCGGTTTAGTTTGATGAATAGAGTTGGCGCTTTTCTTGGAGATGTAAGAAGAGTTTCACCGAACGTTGTCGTTTTCGTGGATAGTGAGGGTTGGACTGAGGCCGGAGCGGCGTCGTTTAAGAGGAATTTAGTGGACAGCTTGAAATTCTATTCGATGGTGATGGAGTCTATAGATGCGGCGGTGGCAGGGGGTGATTGGGTCCGGAGAATTGAGAATTATGTGTTGAGGCCGAGAATATTGGCGGCTGTTGAAGCAGCGGCGGCCGGAAGGAGGCCGGAGGCAGCGGCGGTTAATTGGAGGGAGGTTTTTAACGGGGCGGGATTGAGGCCCTTGCAGCTCAGTCAGTTTGCTGACTTTCAAGCTGATTGTTTGATTGGGAAGGTTCAGGTGAGAGGTTTCCACGTGGTGAAACATCATGCTGAGCTGGTGCTTTGTTGGCACGAGAGGGGCCTGGTCACCACGTCAGCTTGGAGGTGTTAA 1758 46.47 MRVPPFNASPQTNSSPNPKLLINSNPRNNTTFHTTNNVVPNLSYEPTSVLDLRRSPSPPKAEKQAQAPANGDQISRSDHHNQEHNSIEWDEHVPHNLDWDSILRDFGLNEDINTPVLIKNNISSLNHNDQVPHLPEFLPSQPLDLAHLVHHSDHHNFNLSEVLYGNNSTTTLPNNFNSLDQLILSPPHDSNNIGFHQSNLNRFEFVEDILRAADCFDSNEVQLAHTILDRLNQRLQYSSTAKPLHRVAFYFKEALQYSLVSSLNNRAGSNTTTLTSHLSSWPEIVDTIRAQKAFSAISPIPMFSHLTTNQALLEALNGSPFIHVIDFDIGLGGQYASLMKEVSEKAEARKMINPRPVLRISAIVPEEYATESRLVRENLHQFAQELKIRFQIDFVLLRTFETVSFKAVKFMDGEQVAVLLSPTIFRRFSLMNRVGAFLGDVRRVSPNVVVFVDSEGWTEAGAASFKRNLVDSLKFYSMVMESIDAAVAGGDWVRRIENYVLRPRILAAVEAAAAGRRPEAAAVNWREVFNGAGLRPLQLSQFADFQADCLIGKVQVRGFHVVKHHAELVLCWHERGLVTTSAWRC 585
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
12 6965512 6967308 - Conep12aG0077700.1 Cone12ag0754 449598
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cone12ag0754 585 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 185 583 IPR005202 GO:0003700(PANTHER)|GO:0005634(PANTHER)|GO:0006355(PANTHER)|GO:0043565(PANTHER)
Cone12ag0754 585 MobiDBLite consensus disorder prediction 1 50 - -
Cone12ag0754 585 MobiDBLite consensus disorder prediction 1 84 - -
Cone12ag0754 585 ProSiteProfiles GRAS family profile. 196 584 IPR005202 -
Cone12ag0754 585 Pfam GRAS domain family 206 584 IPR005202 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cone12ag0754 Cone-Chr12:6965512 Cone15ag0550 Cone-Chr15:2749321 9.16E-63 dispersed
Cone12ag0754 Cone-Chr12:6965512 Cone6ag1617 Cone-Chr6:12490663 6.08E-19 wgd
Cone12ag0754 Cone-Chr12:6965512 Cone8ag0799 Cone-Chr8:8031598 0 wgd
Cone12ag0754 Cone-Chr12:6965512 Cone9ag1542 Cone-Chr9:11208012 1.64E-21 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
44476 PF01053 Cys_Met_Meta_PP 7.50E-83 CL0061 Cone TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cone12ag0754 K27747 - csv:116401665 575.474