Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cone12ag0761 ATGCCGACATGGAAGGAGAGGGAGAACAATAAGAGGAGGGAAAGGAGGAGGAGAGCCATTGCTGCCAAGATTTACTCTGGTCTTAGAGCTCAGGGAAACTATAAGCTCCCTAAACACTGCGACAATAACGAGGTCTTGAAGGCTCTCTGTTCTGAATCTGGTTGGATCGTCGAAGACGATGGCACGACCTACCGCAAGGGATTCAAGCCACCTACAGGCGACATAGCGGGCCCGTCCGTAAACATGAGCTCTTGTTCCTCCCTTCAACTGAGCCCACAATCATCATCCTTCCCAAGCCCCATTCCATCCTACCATGCCAGTCCATCTTCCTCCCCCTTCCAAAGCCCAACCCATTTCGAAAACCCCTCCTCATACCTCCTCCCATTTCTCCAAAACATAGCTTCCATACCCAATAATCTCCCTCCCCTTAGAATATCAAATAGTGCACCTGTAACCCCTCCTCTCTCTTCTCCCACCTCTAGAGGCTCAAAACGGAAGTCAGACTGGGAGACTCTAACCAACGGGTCCTTAACATCTTTCCGCCATCCCCTTTTTGCTGCATCAGCTCCTTCAAGCCCAACCAGACGGGCCCACCTTACCCCGGCCACGATCCCAGAATGTGATGAGTCTGATGCTTCCACCGTGGACTCAGGTCGGTGGGTCAGCTTCCAGATGGTGGGGCCTGCAGGGGGGGCTGCACCGCCTTCGCCAACGTTCAATCTAATGAAGCCGATGAGTCATCAGGGTTTACTCCATGATGGGGTTGACCATGGTGGGGTTGGGCGGGGGATGACCGGAACTGGTGCAGAGTTTGAGTTTGAGAGTGGGACGGTTAAGCCGTGGGAAGGGGAGAGGATTCATGAGGTTGGCGTGGATGAGTTGGAGCTTACTCTTGGAAGTGGGAAGACTCATTAA 915 53.22 MPTWKERENNKRRERRRRAIAAKIYSGLRAQGNYKLPKHCDNNEVLKALCSESGWIVEDDGTTYRKGFKPPTGDIAGPSVNMSSCSSLQLSPQSSSFPSPIPSYHASPSSSPFQSPTHFENPSSYLLPFLQNIASIPNNLPPLRISNSAPVTPPLSSPTSRGSKRKSDWETLTNGSLTSFRHPLFAASAPSSPTRRAHLTPATIPECDESDASTVDSGRWVSFQMVGPAGGAAPPSPTFNLMKPMSHQGLLHDGVDHGGVGRGMTGTGAEFEFESGTVKPWEGERIHEVGVDELELTLGSGKTH 304
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
12 7015882 7018060 - Conep12aG0078400.1 Cone12ag0761 449605
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cone12ag0761 304 MobiDBLite consensus disorder prediction 77 117 - -
Cone12ag0761 304 MobiDBLite consensus disorder prediction 145 162 - -
Cone12ag0761 304 PANTHER BES1/BZR1 HOMOLOG PROTEIN 3-RELATED 1 304 IPR033264 GO:0003700(InterPro)|GO:0006351(InterPro)|GO:0009742(InterPro)
Cone12ag0761 304 MobiDBLite consensus disorder prediction 68 117 - -
Cone12ag0761 304 MobiDBLite consensus disorder prediction 145 169 - -
Cone12ag0761 304 Pfam BES1/BZR1 plant transcription factor, N-terminal 1 121 IPR008540 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cone12ag0761 Cone-Chr12:7015882 Cone4ag1892 Cone-Chr4:13494607 9.33E-95 dispersed
Cone12ag0761 Cone-Chr12:7015882 Cone8ag0795 Cone-Chr8:7987106 2.34E-151 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
44478 PF16596 MFMR_assoc 1.40E-41 No_clan Cone TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cone12ag0761 K14503 - mdm:103401849 429.098