Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cone12ag0780 ATGGCACAATCTATGTGCTCAAATTTCCTCTTACTTTTTGTCTCCCTTCTAGCCATTGCACCCCTTTGCTTCTCTCACAAGCTAGGTGGAGGGAGCGGCACTAGCGCCTCTCTGTACCCCAACTTTTACTACAAATCTTGCCCAAAAGCAGAACAAATAGTGAAATTAACAATATCAAAAGCCTTCGCAAAAGAAGCCCGCATAGCTGCCTCATTGCTTAGGCTCCATTTCCATGACTGTTTTGTGCAAGGCTGTGATGCATCATTGCTGTTAGATAGCAATGGAGGCATAACAAGTGAGAAAGGGTCTAACCCTAACCGGAACTCGGCTCGTGGGTTCGATGTGATCGACCAGATCAAATCGGAGTTAGAGAAGGAGTGCCCTCGTACCGTTTCTTGTGCTGATATCTTGGCCTTAGCTGCAAGAGACTCCACTGTTATAACAGGTGGGCCCAGTTGGGAAGTGGCATTAGGAAGAAGGGACTCGAGAAGTGCAAGTTTGAGTGGTTCTAACAACAATATTCCTGCTCCAAACAATACCTTTGATACTATTCTCAACAAGTTCAAGAATCAAGGCCTTGATATCATTGACCTTGTTGCTCTTTCTGGGAGCCACACTATAGGGAATTCAAGATGTACGAGTTTCAGACAGAGATTATACAACCAATATGGCAACGGGCAAGCCGACCGGACACTCGACCAATCATATGCTGCCCAACTGCGCAGACAATGTCCCAGGTCAGGTGGGGACCAGAACCTGTTCTTCCTAGATTTCACAACCCCAACGAGGTTTGATAATAACTACTTCAAGAACATCTTGGTCTCAAAGGGTCTGCTCAATTCTGACCAAGTTCTTCTAACCAAGAACAAGCAGTCAGCAGAGTTGGTGAAGAAATATGCAGAAGACCTACAAGCTTTCTTCCAGCAGTTTGTTAAGTCTGTGATTAAGATGGGAAATATCTCTCCTCTTACAGGATCTAATGGAGAGGTTAGGGTCAATTGTCGGAGGGTTAATTGA 1017 45.13 MAQSMCSNFLLLFVSLLAIAPLCFSHKLGGGSGTSASLYPNFYYKSCPKAEQIVKLTISKAFAKEARIAASLLRLHFHDCFVQGCDASLLLDSNGGITSEKGSNPNRNSARGFDVIDQIKSELEKECPRTVSCADILALAARDSTVITGGPSWEVALGRRDSRSASLSGSNNNIPAPNNTFDTILNKFKNQGLDIIDLVALSGSHTIGNSRCTSFRQRLYNQYGNGQADRTLDQSYAAQLRRQCPRSGGDQNLFFLDFTTPTRFDNNYFKNILVSKGLLNSDQVLLTKNKQSAELVKKYAEDLQAFFQQFVKSVIKMGNISPLTGSNGEVRVNCRRVN 338
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
12 7133940 7135609 + Conep12aG0080300.1 Cone12ag0780 449624
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cone12ag0780 338 FunFam Peroxidase 41 183 - -
Cone12ag0780 338 PANTHER PEROXIDASE 72-RELATED 12 337 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cone12ag0780 338 Gene3D Peroxidase, domain 2 175 318 - -
Cone12ag0780 338 PRINTS Plant peroxidase signature 312 325 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cone12ag0780 338 PRINTS Plant peroxidase signature 196 208 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cone12ag0780 338 PRINTS Plant peroxidase signature 130 140 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cone12ag0780 338 PRINTS Plant peroxidase signature 271 288 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cone12ag0780 338 PRINTS Plant peroxidase signature 111 124 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cone12ag0780 338 PRINTS Plant peroxidase signature 149 164 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cone12ag0780 338 PRINTS Plant peroxidase signature 71 91 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cone12ag0780 338 PRINTS Plant peroxidase signature 47 66 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cone12ag0780 338 PRINTS Plant peroxidase signature 255 270 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cone12ag0780 338 Gene3D - 42 338 - -
Cone12ag0780 338 Pfam Peroxidase 55 302 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cone12ag0780 338 PRINTS Haem peroxidase superfamily signature 197 212 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cone12ag0780 338 PRINTS Haem peroxidase superfamily signature 149 161 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cone12ag0780 338 PRINTS Haem peroxidase superfamily signature 131 148 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cone12ag0780 338 PRINTS Haem peroxidase superfamily signature 257 272 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cone12ag0780 338 PRINTS Haem peroxidase superfamily signature 69 83 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cone12ag0780 338 ProSitePatterns Peroxidases active site signature. 69 80 IPR019794 GO:0004601(InterPro)
Cone12ag0780 338 ProSiteProfiles Plant heme peroxidase family profile. 37 338 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cone12ag0780 338 FunFam Peroxidase 175 317 - -
Cone12ag0780 338 ProSitePatterns Peroxidases proximal heme-ligand signature. 197 207 IPR019793 -
Cone12ag0780 338 SUPERFAMILY Heme-dependent peroxidases 38 338 IPR010255 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cone12ag0780 338 CDD secretory_peroxidase 38 337 IPR033905 GO:0004601(InterPro)|GO:0042744(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cone12ag0780 Cone-Chr12:7133940 Cone4ag1937 Cone-Chr4:13681554 1.18E-127 dispersed
Cone13ag0525 Cone-Chr13:5541151 Cone12ag0780 Cone-Chr12:7133940 2.43E-52 dispersed
Cone8ag0217 Cone-Chr8:1183245 Cone12ag0780 Cone-Chr12:7133940 8.72E-90 transposed
Cone12ag0780 Cone-Chr12:7133940 Cone6ag1651 Cone-Chr6:12612075 9.33E-182 wgd
Cone12ag0780 Cone-Chr12:7133940 Cone9ag1575 Cone-Chr9:11337036 6.84E-133 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cone12ag0780 K00430 - csv:101223204 516.153