Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cone12ag0799 ATGGAGGGAGGAACAGCTCAGCCTGACGACACCGTGATGTCAGAGGCGGCGCCGCCTCCGCCACCGGCTCAATCCGATCCTCAGGCGCACCAGTATCAGCAGCAGGTCCCGCCCGGGATGGAGAACATTCCGGCGACTCTCAGCCACGGCGGAAGGTTTATTCAGTACAACATATTCGGCAATATCTTCGAAGTTACGGCCAAGTACAAGCCTCCTATCTTGCCTATCGGCAAAGGCGCTTACGGCATAGTCTGCTCTGCTTTGAACTCGGAGACGAACGAGCATGTGGCGGTTAAGAAGATTGCCAATGCGTTTGACAATAAGATTGACGCCAAGAGGACTCTTCGCGAGATCAAGCTGCTCCGGCACATGGATCATGAAAACGTTGTTGCTATCAGGGATATTATACCACCACCCCAAAGGGAGACATTTAATGACGTGTACATAGCATATGAGCTTATGGACACTGACCTGCATCAAATAATTCGTTCTAATCAAGCATTATCTGAGGAGCACTGTCAGATTCTCCGTGGACTGAAGTACATACATTCAGCAAATGTCCTGCACAGGGATTTAAAACCTTCTAATCTGCTACTGAATGCCAACTGTGACTTGAAGATATGTGATTTTGGACTTGCTCGTGTTACCTCAGAAACTGATTTCATGACTGAATATGTTGTCACAAGATGGTACCGTGCACCAGAGCTACTATTGAACTCATCAGATTACACTGCAGCTATTGATGTATGGTCTGTTGGCTGTATTTTCATGGAACTGATGGATCGGAAGCCCTTATTTCCTGGCAGAGATCATGTGCATCAGTTGCGTTTGCTTATGGAGCTTATCGGCACCCCATCAGAGGCTGACCTTGGGTTTTTTAATGAAAATGCCAAGAGATACATTCGCCAACTTCCTCTTTACCATCCCCATTCCTTAACTGAAAAGTTTCCACATGTCCATCCTGCAGCTATTGATCTTGTTGAGAAAATGTTGACATTTGATCCCAGGAAGAGACTTACTGTTGAAGAATCTCTTGCTCATCCCTACCTGACTTCATTGCATGACATAAGTGACGAGCCTGCGTGCATGACGCCCTTCAGCTTTGACTTTGAGCAGCATGCTCTGACCGAGGAGCAGATGAAAGAGCTGATATATAGAGAGGCACTTGCATTTAATCCCGAGTATCAGCATTAG 1194 46.9 MEGGTAQPDDTVMSEAAPPPPPAQSDPQAHQYQQQVPPGMENIPATLSHGGRFIQYNIFGNIFEVTAKYKPPILPIGKGAYGIVCSALNSETNEHVAVKKIANAFDNKIDAKRTLREIKLLRHMDHENVVAIRDIIPPPQRETFNDVYIAYELMDTDLHQIIRSNQALSEEHCQILRGLKYIHSANVLHRDLKPSNLLLNANCDLKICDFGLARVTSETDFMTEYVVTRWYRAPELLLNSSDYTAAIDVWSVGCIFMELMDRKPLFPGRDHVHQLRLLMELIGTPSEADLGFFNENAKRYIRQLPLYHPHSLTEKFPHVHPAAIDLVEKMLTFDPRKRLTVEESLAHPYLTSLHDISDEPACMTPFSFDFEQHALTEEQMKELIYREALAFNPEYQH 397
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
12 7308159 7312920 - Conep12aG0082200.1 Cone12ag0799 449643
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cone12ag0799 397 Gene3D Phosphorylase Kinase; domain 1 53 387 - -
Cone12ag0799 397 FunFam Mitogen-activated protein kinase 55 164 - -
Cone12ag0799 397 Pfam Protein kinase domain 76 350 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cone12ag0799 397 SMART serkin_6 70 350 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cone12ag0799 397 ProSiteProfiles Protein kinase domain profile. 70 350 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cone12ag0799 397 ProSitePatterns Protein kinases ATP-binding region signature. 76 100 IPR017441 GO:0005524(InterPro)
Cone12ag0799 397 ProSitePatterns MAP kinase signature. 105 203 IPR003527 GO:0004707(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cone12ag0799 397 SUPERFAMILY Protein kinase-like (PK-like) 75 358 IPR011009 -
Cone12ag0799 397 MobiDBLite consensus disorder prediction 27 41 - -
Cone12ag0799 397 MobiDBLite consensus disorder prediction 1 43 - -
Cone12ag0799 397 CDD STKc_TEY_MAPK 63 393 - -
Cone12ag0799 397 ProSitePatterns Serine/Threonine protein kinases active-site signature. 187 199 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Cone12ag0799 397 FunFam Mitogen-activated protein kinase 154 377 - -
Cone12ag0799 397 Gene3D Transferase(Phosphotransferase) domain 1 154 377 - -
Cone12ag0799 397 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE 63 388 IPR050117 GO:0004674(PANTHER)|GO:0004707(PANTHER)|GO:0005634(PANTHER)|GO:0005737(PANTHER)|GO:0035556(PANTHER)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cone12ag0799 Cone-Chr12:7308159 Cone5ag1201 Cone-Chr5:5436270 2.12E-207 dispersed
Cone12ag0799 Cone-Chr12:7308159 Cone8ag0764 Cone-Chr8:7689117 1.15E-280 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
81962 PF13639 zf-RING_2 1.20E-12 CL0229 Cone PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cone12ag0799 K14512 - csv:101204301 732.635