Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Cone12ag0813 | ATGATGAACCACTCCTCGTTCAGTATTCTGCTGGCCCTTTTAGTCATCCTTCTTTCCTTTGGCCTCTTCACCAACCAAACCCTACTTCTTTCCACTTTCACTCTCTCTATCTTCTTCACCCTCTCTCTTAACTACTGGCTTATTCCCGGCGGTTTTGCTTGGCGAAATTATAACCATCGCCATCACCATGATCAAGATCAAAACTCTCCAGCAAAACTTATCGGGCCTGCTGGGTGGCCCATATTTGGAACCTTACCACAAATGGGCTCACATTTCCATCGCAAGTTAGCCTCACTAGCGACATCGTTTCAAGCAACCAAACTAATGTCGTTTAGTTTAGGTGCTACGAGAATGATCATAAGCAGCCACCCTGAAACCGCCAAGGAAATCTTATGCGGGCCCGCATTTTCCGACCGCCCGATCAAGAAATCAGCTTCCTTGCTGATGTTCGAGCGGGCCATCGGATTCGCTCCCTCAGGCACTTATTGGCGACATCTTCGTAGAATCGCTGCTAATTGTATGTTCTCCCCGAAGAGGATTTCAAGCCTAGAGCCACTGAGACGGCATGTCGTGGAGGAAATGTTAGGGCGTGTTTGGGAGGAAATGGGAATGAAAGGGGTGGTGGAAGTGAGAGGGATTCTACAAAGTGGGTCGTTAAGGAATGTTATGGAGAGTGTGTTCGGAAGTGGTTTAGGACTAGAGAGGGAGAAGGAGGTGAGTGATATGGTGAGAGAAGGGTATGAGCTTATAGAGAAGTTTAACTGGGAGGATTTTTTACCGTTGAGGTTTTTGGATTTTTATGGAGTGAAGAGGAAGTGTAATGGGTTGGCTGCTAAGGTTGGTAGAGTTATAGGGGAGATTGTTAGTGAGAGGAAGAGTAGTGATGATAATAATACTAAGGGAGTGTTTGGCTTGGGTGGAAATGACTTCCTTTCTGCTCTGCTGTCTCTGCCTGTTGAAGATCGGTTGAGTGACTCAGACATGGTTGCCGTTTTATGGGAAATGATATTTCGTGGAACCGACACGGTCGCCATACTTCTGGAATGGATCATGGCTAGGATGGCATTACACCAAGACATTCAGGCAAAAATCCAACAAGAGATTAACACGTGCGTTGACAGCAACAGGCACGTGCGAGATTCCGACATTCCTAACCTCCCTTACCTCCAGGCAGTGGTGAAGGAAGTTCTTAGAATGCATCCTCCAGGCCCATTACTCTCATGGGCACGTCTCGCAATCCACGACGTTCATGTGGGGAAGGTCTTCATCCCAGCTGGCACTACGGCAATGGTCAATATGTGGGCCATAACCCACAACCCGTATATTTGGAAAGACCCATTTACATTCCGGCCCGAGCGGTTCATCGAAGAGGATGTTTCTATAATGGGATCTGATCTGAGGCTAGCACCTTTTGGGTCGGGCCGTAGGGTGTGTCCAGGTAAGGCACTGGGCTTAGCCACGGTGCAGCTGTGGCTGGCTAGGTTTCTCCAGGAGTTCAAATGGATTCCGGCACAGCCGACCGTTGATCTGTCAGAATGCCTGAAACTCTCTCTTGAAATGAAGAAGCCGTTGGCTTGTCGCGTGATCCGTAAGTAA | 1596 | 48.37 | MMNHSSFSILLALLVILLSFGLFTNQTLLLSTFTLSIFFTLSLNYWLIPGGFAWRNYNHRHHHDQDQNSPAKLIGPAGWPIFGTLPQMGSHFHRKLASLATSFQATKLMSFSLGATRMIISSHPETAKEILCGPAFSDRPIKKSASLLMFERAIGFAPSGTYWRHLRRIAANCMFSPKRISSLEPLRRHVVEEMLGRVWEEMGMKGVVEVRGILQSGSLRNVMESVFGSGLGLEREKEVSDMVREGYELIEKFNWEDFLPLRFLDFYGVKRKCNGLAAKVGRVIGEIVSERKSSDDNNTKGVFGLGGNDFLSALLSLPVEDRLSDSDMVAVLWEMIFRGTDTVAILLEWIMARMALHQDIQAKIQQEINTCVDSNRHVRDSDIPNLPYLQAVVKEVLRMHPPGPLLSWARLAIHDVHVGKVFIPAGTTAMVNMWAITHNPYIWKDPFTFRPERFIEEDVSIMGSDLRLAPFGSGRRVCPGKALGLATVQLWLARFLQEFKWIPAQPTVDLSECLKLSLEMKKPLACRVIRK | 531 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 12 | 7411071 | 7413857 | - | Conep12aG0083800.1 | Cone12ag0813 | 449657 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Cone12ag0813 | 531 | FunFam | Cytochrome P450 78A5 | 65 | 531 | - | - | |
| Cone12ag0813 | 531 | SUPERFAMILY | Cytochrome P450 | 75 | 529 | IPR036396 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cone12ag0813 | 531 | PANTHER | CYTOCHROME P450 78A7-RELATED | 15 | 528 | IPR051996 | - | |
| Cone12ag0813 | 531 | PRINTS | P450 superfamily signature | 338 | 355 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cone12ag0813 | 531 | PRINTS | P450 superfamily signature | 478 | 489 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cone12ag0813 | 531 | PRINTS | P450 superfamily signature | 469 | 478 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cone12ag0813 | 531 | PRINTS | P450 superfamily signature | 391 | 402 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cone12ag0813 | 531 | PRINTS | E-class P450 group I signature | 327 | 344 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cone12ag0813 | 531 | PRINTS | E-class P450 group I signature | 432 | 456 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cone12ag0813 | 531 | PRINTS | E-class P450 group I signature | 468 | 478 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cone12ag0813 | 531 | PRINTS | E-class P450 group I signature | 390 | 408 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cone12ag0813 | 531 | PRINTS | E-class P450 group I signature | 478 | 501 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cone12ag0813 | 531 | PRINTS | E-class P450 group I signature | 347 | 373 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cone12ag0813 | 531 | Gene3D | Cytochrome P450 | 58 | 529 | IPR036396 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cone12ag0813 | 531 | ProSitePatterns | Cytochrome P450 cysteine heme-iron ligand signature. | 471 | 480 | IPR017972 | GO:0005506(InterPro)|GO:0016705(InterPro) | |
| Cone12ag0813 | 531 | Pfam | Cytochrome P450 | 75 | 507 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Cone12ag0813 | Cone-Chr12:7411071 | Cone16ag0218 | Cone-Chr16:1516225 | 1.45E-181 | dispersed | |
| Cone12ag0813 | Cone-Chr12:7411071 | Cone8ag0835 | Cone-Chr8:8371094 | 5.31E-53 | wgd | |
| Cone12ag0813 | Cone-Chr12:7411071 | Cone8ag0751 | Cone-Chr8:7588980 | 0 | wgd |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Cone12ag0813 | - | - | - | 0.0 |