Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cone12ag0836 | ATGTTATCAAAGTTAATGAGCTTTCTAAGGGCATGCTGGAGGGCTTCCTCCGACCCATATATTCACACAAGTCCGGATTCTGCTGGACGGCAAGAGGGATTACTCTGGTATAAGGACATTGGGCAGCACGTCAATGGTGATTTCTCAATGGCTGTCGTTCAAGCCAATAATTTGCTGGAGGATCAGAGCCAGGTCGAGTCTGGTCCCTTGAGCTTGCTCGAGTCGGGCCCATATGGCACCTTTGTTGGAGTTTATGACGGCCATGGTGGACCCGAAACATCACGATACATCTATGACAATTTATTCCCACATCTGAAAAGGTTCACCTCTGAACAGCAATCAATGTCAGTGGATGTGATAAAAAAGGCATTTCAAGCAACAGAGGAGGGGTTTATGTCTATTGTGACTAAACAATGGCCTACTAATCCTCAACTTGCAGCTGTTGGATCTTGCTGCCTGGTTGGTGTGGTTTGTGGTGGGATCCTTTACATTGCAAATGTTGGAGATTCCCGTGCTGTGCTTGGGAGACTTGTTAGGTCGACAGGTCAGGTTCTTGCCATTCAGCTATCGTCGGAACATAATGCAAGCGTAGAATCTGTTAGGCAAGAGATGCAGTCTTTGCATCCAGATGACCCACGGATAGTAGTTCTAAAGCATAATGTATGGCGAGTAAAGGGATTGATACAGGTGACTAGATCCATTGGTGATGTGTATCTAAAAAAGGCCGAATTTAACAGGGAACCTTTGTTTCCCAAGTTTCGACTTAGAGAATCCTTCAGTAAGCCAATTTTGAGCTCTGAGCCGTCCGTTTTGGTTCAAGAACTACAAGCTGAAGATCAATTTCTCATATTTGCTTCTGATGGACTATGGGAGCACCTTACCAACCAGGATGCAGTCGATATAGTTCAAAATCATCCACATAGTGGAAGTGCAAGGCGGCTTGTGAAATCTGCACTGCTAGAGGCAGCTAAGAAAAGAGAAATGCGATACTCAGATTTAAAGAAAATCGACCGTGGGGTCCGCCGCCATTTTCATGATGACATCACAGTCATTGTCCTGTTCCTCGATTCCAATCTTGTGAGCCATGCCAGCTCAGCTAGAGGCCCTGTCTTGTCTGTAAGAGGAGGTGGTGTTAACCTACCCGCAAAATCTCTAGCCCCTTGTTCCACCCCAACCGAAAAAGTGTCTGTCCAATGA | 1197 | 45.95 | MLSKLMSFLRACWRASSDPYIHTSPDSAGRQEGLLWYKDIGQHVNGDFSMAVVQANNLLEDQSQVESGPLSLLESGPYGTFVGVYDGHGGPETSRYIYDNLFPHLKRFTSEQQSMSVDVIKKAFQATEEGFMSIVTKQWPTNPQLAAVGSCCLVGVVCGGILYIANVGDSRAVLGRLVRSTGQVLAIQLSSEHNASVESVRQEMQSLHPDDPRIVVLKHNVWRVKGLIQVTRSIGDVYLKKAEFNREPLFPKFRLRESFSKPILSSEPSVLVQELQAEDQFLIFASDGLWEHLTNQDAVDIVQNHPHSGSARRLVKSALLEAAKKREMRYSDLKKIDRGVRRHFHDDITVIVLFLDSNLVSHASSARGPVLSVRGGGVNLPAKSLAPCSTPTEKVSVQ | 398 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
12 | 7563588 | 7568304 | + | Conep12aG0086100.1 | Cone12ag0836 | 449680 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cone12ag0836 | 398 | ProSiteProfiles | PPM-type phosphatase domain profile. | 47 | 355 | IPR001932 | - | |
Cone12ag0836 | 398 | SMART | PP2C_4 | 41 | 353 | IPR001932 | - | |
Cone12ag0836 | 398 | CDD | PP2Cc | 48 | 355 | IPR001932 | - | |
Cone12ag0836 | 398 | SUPERFAMILY | PP2C-like | 56 | 356 | IPR036457 | - | |
Cone12ag0836 | 398 | Gene3D | - | 37 | 366 | IPR036457 | - | |
Cone12ag0836 | 398 | Pfam | Protein phosphatase 2C | 80 | 325 | IPR001932 | - | |
Cone12ag0836 | 398 | PANTHER | PROTEIN PHOSPHATASE | 41 | 354 | IPR015655 | GO:0004722(InterPro)|GO:0004722(PANTHER)|GO:0006470(InterPro)|GO:0035970(PANTHER) | |
Cone12ag0836 | 398 | ProSitePatterns | PPM-type phosphatase domain signature. | 81 | 89 | IPR000222 | GO:0043169(InterPro) | |
Cone12ag0836 | 398 | FunFam | Phosphatase 2C family protein | 36 | 365 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cone12ag0836 | Cone-Chr12:7563588 | Cone20ag0618 | Cone-Chr20:3681526 | 3.61E-213 | dispersed | |
Cone12ag0836 | Cone-Chr12:7563588 | Cone12ag1243 | Cone-Chr12:9613531 | 6.25E-214 | wgd | |
Cone12ag0836 | Cone-Chr12:7563588 | Cone8ag0870 | Cone-Chr8:8576582 | 2.83E-278 | wgd | |
Cone12ag0836 | Cone-Chr12:7563588 | Cone8ag1300 | Cone-Chr8:10628497 | 6.94E-210 | wgd |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cone12ag0836 | K01102 | - | cit:102615075 | 665.996 |