Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cone12ag0844 ATGGTTATTGATGAAGACGTTGAGAGCTCCGGTAGTAGAGCGGCGAACTCGTTGCAGGCAAATCCGCGGAAACAGAGGCAGAAGCTTGAGGTTTATACTGAGGTGCTTCGACGAATCCAGGAATTGAATCACGAAGAGGCACATCTTCCGGGATTTGATGATCAGCTTTGGATCCATTTTAATCGTCTTCCTGCTCGATATGCATTGGATGTGAACGTGGAGAGAGCGGAGGATGTACTCACTCACAAGAGATTGCTGCAGTTGGCAGAAGACCTTGTCAATCATCCTGTTTTTGAAGTTCGTCTAGTGCAGGTTTATCCTGCTGCCAATGGAAACTCTATTGATTCCATTAACTTAGATTCTTCAATGAGAGAAGATGCACAGAGTTCTTTTAATTATTCTACAAGACAGGGGATCCATCCACCTCCTACCTTTGGTTCATCACATAATCTGGAGGCAGTTGGACTTCAAGCCAACAAATATCATGCTGAAGACAAAGATAGTGCTCTGAGTGTGACTCCATGCTTTTCTCGGCCTATGCACGAGATCACATTTTCAACAATTGACAAGCCTAAACTCCTTAGTCAGCTAACTTCCTTACTTGCTGAGATTGGGTTAAACATACAAGAAGCTCATGCTTTCTCTACTGTTGATGGGTTCTCTTTGGATGTCTTTGTCGTTGAGGGTTGGCCTCATGAGGAAACTGATGAGCTTAAAAGCGCATTGGAAAAGGAAATTATAAACTTTAAGGCTGTATCAAAACAGAATTCAACTCCTGTCATTGGCGAGCATAACCAGGAAAGAGTTGAAACTATTCCTAGTTTCGTAGAAATACCAACTGATGGGATTGATGTCTGGGAAATTGACACCAAACAGCTAAAAGTTGAGAACAAAGTTGGATCTGGGTCATTTGGCGATTTGTATCGAGGTACATATTGCAGTCAGGAAGTGGCTATCAAGATACTGAAGCCTGAGCGTATCAATGGAGAGATGCTGAAAGAGTTCTCTCAGGAAGTTTATATTATGAGGAAAGTTCGGCACAAGAATGTTGTGCAATTTATCGGTGCATGTACTAGACCTCCAAACCTATGCATAGTGACTGAGTTTATGTCTAGAGGAAGTGTATACGACTTCCTTCATAAACAAAAAGGTGTTTTTAAGCTACCATCTCTACTCAAAGTAGCAATTGATGTTTCCAAAGGGATGAACTACTTGCACCAAAATAATATAATTCACAGAGATCTCAAGACTGCCAATCTCCTGATGGATGAAAATGAGGTTGTTAAGGTTGCTGATTTTGGGGTTGCCAGAGTCCAAGCCCAATCTGGAGTGATGACTGCTGAAACTGGGACATACCGCTGGATGGCTCCTGAGGTAATTGAACACAAGCCCTATGATCACAAGGCAGATATCTTCAGTTTTGGAATAGCCTTGTGGGAACTTCTAACTGCAGAGATCCCTTACTCATACTTGACCCCACTACAAGCTGCAGTTGGTGTTGTCCAGAAGGGAATAAGGCCAAAAATCCCCAAGAATACTCACCCAAGGCTTGTAGAGGTGCTCGAGAAATGCTGGCAGCAAGATCCAAGTCTAAGACCAAACTTCTCTGAAATTCTAGAAAACCTTCAGCAGATAGCAGAGCAGGTTGAGAATGATGGGGAAGATCGGCACAAGAAGGATAAATCATCTGGTGGTTTCTTTTCAGTGCTTAGACGGGGACATTAA 1725 42.84 MVIDEDVESSGSRAANSLQANPRKQRQKLEVYTEVLRRIQELNHEEAHLPGFDDQLWIHFNRLPARYALDVNVERAEDVLTHKRLLQLAEDLVNHPVFEVRLVQVYPAANGNSIDSINLDSSMREDAQSSFNYSTRQGIHPPPTFGSSHNLEAVGLQANKYHAEDKDSALSVTPCFSRPMHEITFSTIDKPKLLSQLTSLLAEIGLNIQEAHAFSTVDGFSLDVFVVEGWPHEETDELKSALEKEIINFKAVSKQNSTPVIGEHNQERVETIPSFVEIPTDGIDVWEIDTKQLKVENKVGSGSFGDLYRGTYCSQEVAIKILKPERINGEMLKEFSQEVYIMRKVRHKNVVQFIGACTRPPNLCIVTEFMSRGSVYDFLHKQKGVFKLPSLLKVAIDVSKGMNYLHQNNIIHRDLKTANLLMDENEVVKVADFGVARVQAQSGVMTAETGTYRWMAPEVIEHKPYDHKADIFSFGIALWELLTAEIPYSYLTPLQAAVGVVQKGIRPKIPKNTHPRLVEVLEKCWQQDPSLRPNFSEILENLQQIAEQVENDGEDRHKKDKSSGGFFSVLRRGH 574
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
12 7624899 7631717 + Conep12aG0086900.1 Cone12ag0844 449688
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cone12ag0844 574 ProSitePatterns Serine/Threonine protein kinases active-site signature. 410 422 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Cone12ag0844 574 Gene3D Phosphorylase Kinase; domain 1 282 371 - -
Cone12ag0844 574 CDD ACT_TyrKc 180 246 - -
Cone12ag0844 574 Pfam Protein tyrosine and serine/threonine kinase 293 542 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
Cone12ag0844 574 ProSiteProfiles Protein kinase domain profile. 293 546 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cone12ag0844 574 SUPERFAMILY Protein kinase-like (PK-like) 265 541 IPR011009 -
Cone12ag0844 574 MobiDBLite consensus disorder prediction 1 23 - -
Cone12ag0844 574 CDD STKc_MAP3K-like 299 542 - -
Cone12ag0844 574 SMART serkin_6 293 545 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cone12ag0844 574 ProSitePatterns Protein kinases ATP-binding region signature. 299 320 IPR017441 GO:0005524(InterPro)
Cone12ag0844 574 PRINTS Tyrosine kinase catalytic domain signature 404 422 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
Cone12ag0844 574 PRINTS Tyrosine kinase catalytic domain signature 469 491 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
Cone12ag0844 574 PRINTS Tyrosine kinase catalytic domain signature 513 535 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
Cone12ag0844 574 PRINTS Tyrosine kinase catalytic domain signature 450 460 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
Cone12ag0844 574 PRINTS Tyrosine kinase catalytic domain signature 367 380 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
Cone12ag0844 574 FunFam Serine/threonine-protein kinase isoform 1 283 371 - -
Cone12ag0844 574 PANTHER SERINE-THREONINE PROTEIN KINASE 25 546 IPR050167 GO:0004672(PANTHER)|GO:0005737(PANTHER)|GO:0007165(PANTHER)
Cone12ag0844 574 FunFam serine/threonine-protein kinase HT1 372 563 - -
Cone12ag0844 574 ProSiteProfiles ACT domain profile. 182 260 IPR002912 -
Cone12ag0844 574 Gene3D Transferase(Phosphotransferase) domain 1 372 565 - -
Cone12ag0844 574 SUPERFAMILY ACT-like 180 244 IPR045865 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cone12ag0844 Cone-Chr12:7624899 Cone17ag0791 Cone-Chr17:6136205 3.51E-164 dispersed
Cone5ag0611 Cone-Chr5:2621354 Cone12ag0844 Cone-Chr12:7624899 6.58E-34 dispersed
Cone4ag1692 Cone-Chr4:12592297 Cone12ag0844 Cone-Chr12:7624899 3.45E-45 transposed
Cone12ag0844 Cone-Chr12:7624899 Cone12ag1251 Cone-Chr12:9642935 4.76E-276 wgd
Cone12ag0844 Cone-Chr12:7624899 Cone7ag1915 Cone-Chr7:12257561 5.13E-231 wgd
Cone12ag0844 Cone-Chr12:7624899 Cone8ag0877 Cone-Chr8:8624044 0 wgd
Cone12ag0844 Cone-Chr12:7624899 Cone8ag1306 Cone-Chr8:10645628 6.97E-120 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
81965 PF00337 Gal-bind_lectin 3.60E-47 CL0004 Cone PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cone12ag0844 - - - 0.0