Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cone12ag0859 | ATGTTCTTAGAAGAAGTAGATGAAGCCATTATCCAGGAGGTTGAAATGGAGGATATAGAAGAAGAAGGTGATGAAGAAGAAGAAGAGTCTGTTATAGATATAGACGGCTGTGATGCAAAGAACCCATTTGCAGTTGTTGATTACGTGGATGATCTCTATGCATTTTACAGAAAGATGGAGGCTCATAGCTGTGTTTTACCAAATTATATGGAGCAACAGTTTGACATTAATGAGAGGATGAGGGCTATATTGATTGACTGGCTTATTGAGGTGCATGACAAGTTTGAATTGATGGGAGAGACATTGTTTCTAACAGTGAACATAATAGACAGATTTCTAGCCCAACAGACAGTGGTGAGAAAGAAGCTTCAGCTAGTTGGACTAGTTGCTTTGCTCTTAGCTTGCAAATACGAAGAGGTTTCTGTTCCCATTGTAGAGGACTTGGTCCTTATTTCAGACAAAGCTTACTCTAGACAAGAAGTCCTTGAAATGGAGACACTCATGCTCAACAAACTGCAGTTCAACATGTCAGTTCCAACTCCCTATGTCTTCATGCAGAGGTTCCTCAAGGCTAGTACAACTACTACTACTGGTACTCAGTCTGAGAAAAAGAAGATAGAGCTACTGTCCTTCTTCTTGATGGAGCTTTCATTGGTTGAGTATGAAATGATCAACTTCTCTCCTTCTTTATTAGCTGCTGCTGCTACCTACACCGCTCAGTGCACTCTTTATGGATTTAAGCAGCAGTGGAGCAGGACCTGTGAATGGCATTCAGGCTACACTCAAGACAAGCTATTAAAATGTTCAAGAATGATGGTGGGTTTTCACCAGAAGGCAGCGACCGGGAAATTGACAGGAGTGTATAGGAAGTATAGTACATCAAAGTATTCATATACTTCAAGAAGTGAGGCAGCTTGTTTTCTTTTGGAGACACGAGAAATATAA | 945 | 40.63 | MFLEEVDEAIIQEVEMEDIEEEGDEEEEESVIDIDGCDAKNPFAVVDYVDDLYAFYRKMEAHSCVLPNYMEQQFDINERMRAILIDWLIEVHDKFELMGETLFLTVNIIDRFLAQQTVVRKKLQLVGLVALLLACKYEEVSVPIVEDLVLISDKAYSRQEVLEMETLMLNKLQFNMSVPTPYVFMQRFLKASTTTTTGTQSEKKKIELLSFFLMELSLVEYEMINFSPSLLAAAATYTAQCTLYGFKQQWSRTCEWHSGYTQDKLLKCSRMMVGFHQKAATGKLTGVYRKYSTSKYSYTSRSEAACFLLETREI | 314 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
12 | 7710310 | 7711796 | - | Conep12aG0088400.1 | Cone12ag0859 | 449703 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cone12ag0859 | 314 | SUPERFAMILY | Cyclin-like | 178 | 301 | IPR036915 | - | |
Cone12ag0859 | 314 | Pfam | Cyclin, C-terminal domain | 179 | 302 | IPR004367 | - | |
Cone12ag0859 | 314 | Gene3D | - | 65 | 177 | - | - | |
Cone12ag0859 | 314 | Gene3D | - | 51 | 300 | - | - | |
Cone12ag0859 | 314 | FunFam | G2/mitotic-specific cyclin-1 | 167 | 300 | - | - | |
Cone12ag0859 | 314 | PIRSF | Cyclin_A_B_D_E | 4 | 313 | IPR046965 | GO:0016538(InterPro)|GO:0044772(InterPro) | |
Cone12ag0859 | 314 | SMART | Cyclin_C_2 | 179 | 305 | IPR004367 | - | |
Cone12ag0859 | 314 | SMART | cyclin_7 | 183 | 274 | IPR013763 | - | |
Cone12ag0859 | 314 | SMART | cyclin_7 | 86 | 170 | IPR013763 | - | |
Cone12ag0859 | 314 | Pfam | Cyclin, N-terminal domain | 51 | 177 | IPR006671 | - | |
Cone12ag0859 | 314 | ProSitePatterns | Cyclins signature. | 81 | 112 | IPR048258 | - | |
Cone12ag0859 | 314 | Coils | Coil | 9 | 29 | - | - | |
Cone12ag0859 | 314 | PANTHER | CYCLINS | 26 | 292 | IPR039361 | GO:0000079(PANTHER)|GO:0000307(PANTHER)|GO:0005634(PANTHER)|GO:0005737(PANTHER)|GO:0016538(PANTHER)|GO:0044772(PANTHER) | |
Cone12ag0859 | 314 | SUPERFAMILY | Cyclin-like | 40 | 176 | IPR036915 | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cone12ag0859 | Cone-Chr12:7710310 | Cone9ag1624 | Cone-Chr9:11579755 | 1.44E-94 | dispersed | |
Cone12ag0859 | Cone-Chr12:7710310 | Cone17ag1451 | Cone-Chr17:9849759 | 3.36E-124 | wgd | |
Cone12ag0859 | Cone-Chr12:7710310 | Cone20ag0025 | Cone-Chr20:155965 | 7.56E-106 | wgd | |
Cone12ag0859 | Cone-Chr12:7710310 | Cone4ag2018 | Cone-Chr4:14050059 | 3.71E-128 | wgd | |
Cone12ag0859 | Cone-Chr12:7710310 | Cone6ag1701 | Cone-Chr6:12844184 | 3.11E-146 | wgd | |
Cone12ag0859 | Cone-Chr12:7710310 | Cone7ag1934 | Cone-Chr7:12340108 | 1.02E-129 | wgd | |
Cone12ag0859 | Cone-Chr12:7710310 | Cone8ag0889 | Cone-Chr8:8686330 | 8.01E-191 | wgd |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cone12ag0859 | K21777 | - | rcu:8268759 | 427.172 |