Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cone12ag0864 ATGGCGATGGAGGAAACCGGCAAAGGGAATAATAGTACTAATTCTCATCGACTGAGAAATTCGCCTCTACTTGATTTGGACCTCAATTTTCTTCCTTCCTCAGATGACATGTCTGAAGATTCCGAGGATCAATGGAACGAATCCCCCGTGTTACCAGGTGGATATGTAGGTGTGATAGAGAATAAGAAAAGGAGGGCAGGAAAAGAACACATTTCAAAAATCGAATTATCGGATCTTGCCAAGTATTTTGACGTGCCTATTATCGAGGCTTCGAGAAATCTCAATGTTGGGTTAACTGTATTGAAAAGGAAATGCAGAGAATTAGGCATTCCTCGTTGGCCTCATAGGAAGATCAAATCCCTTGACGGTTTAATTCATGATCTCCAGGAAAAGGCAAAGCAGCAAGAGCAGGATGACAAGGCAGCCGTGGCTGTGGCCAAGAGGAAGAAGATATTGGAGAGTGAAAAAGCGAGGATTGAGAGGACGCCTGTTATTGACTTACAGATTGAGACCAAGAAATTCAGACAGGATGTTTTCAAGAGAAGGTATAGGGCTAGAGCCCTTAGAAATCAGGGCATATCCATTTCTAGTAATTAG 597 42.71 MAMEETGKGNNSTNSHRLRNSPLLDLDLNFLPSSDDMSEDSEDQWNESPVLPGGYVGVIENKKRRAGKEHISKIELSDLAKYFDVPIIEASRNLNVGLTVLKRKCRELGIPRWPHRKIKSLDGLIHDLQEKAKQQEQDDKAAVAVAKRKKILESEKARIERTPVIDLQIETKKFRQDVFKRRYRARALRNQGISISSN 198
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
12 7730896 7731878 - Conep12aG0088900.1 Cone12ag0864 449708
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cone12ag0864 198 Pfam RWP-RK domain 73 121 IPR003035 -
Cone12ag0864 198 PANTHER PROTEIN RKD4 61 192 IPR044607 GO:0003700(InterPro)
Cone12ag0864 198 MobiDBLite consensus disorder prediction 1 20 - -
Cone12ag0864 198 Coils Coil 118 138 - -
Cone12ag0864 198 ProSiteProfiles RWP-RK domain profile. 56 141 IPR003035 -
Cone12ag0864 198 MobiDBLite consensus disorder prediction 27 47 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cone12ag0864 Cone-Chr12:7730896 Cone14ag0006 Cone-Chr14:49551 9.96E-20 dispersed
Cone2ag0843 Cone-Chr2:34429850 Cone12ag0864 Cone-Chr12:7730896 1.24E-24 transposed
Cone12ag0864 Cone-Chr12:7730896 Cone8ag0893 Cone-Chr8:8705777 4.19E-125 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
44485 PF02536 mTERF 5.90E-20 No_clan Cone TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cone12ag0864 - - - 0.0