Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cone12ag0880 ATGAAGATGGTAGGGATGGCGCTGCTGCGTCTCTGTTTGTGGTCCCTGCTGGCCGGAGCCGCCATGGGAGCCCCCGCCCCCGCCAAGGACAGCACAACAAGGGACTTGGATCGAACGCCGACTTGGGCTGTTGCTGGTGTTTGCGCTGTTATGATCTTACTCTCCATCGGTTTAGAGAAAGTCCTCCACAAAATTGGACACTGGTTGACTGAAAGGCATAAGAATGCTATGTATGAAGCTCTGGAAAAAGTTAAAGATGAGCTAATGATATTGGGTTTCATTTCTCTTCTGCTAACATTCAGTCAATACTACATAGCCGAAATCTGTATACCCATTGAGGTAGCAGACACTATGTTACCATGTAAGGCTGAAAAGGGTTATGTCAAAGAAGAGAATAAGCGGCAGCTCTTATCCTACGACCGCCGCGTTTTGGCGGGTGGCTACCCTTCTGCTTGCAAAGATGGTAAAGTACCACTTATAACTGTAAATGGATTGCATCAACTGCACATACTCATATTCTTCTTAGCTGTGTTTCATGTGGTTTACAGTGCCATTACCATGGCGCTTGGTAGATTAAAGATTCGCGGGTGGAAGGATTGGGAAAAGGAGACTTCTTCTCATGACTATGAGTTTTCTAATGATCCTACAAGGTTTAGGCTTACTCATGAAACATCCTTTGTGAGAGCTCATACCAGTTTCTGGACTCGAATTCCCTTCTTCTTTTACTTTGGCTGCTTTTTGCGACAGTTTTTCCGGTCAGTTGGTAAGACCGATTACATGACACTTCGAAATGGATTCATCACTGATCATTTAGCTCCCGGGACGAAATTCAACTTTCAAAAGTATATCAAAAGGTCACTAGAGGATGACTTCAAGTTAATTGTGGGAGTAAGTCCTGTCTTGTGGGCATCATTTGTGATTTTCTTGCTTCTGAATGTGGCAGGGTGGCAGGCATTATTTTGGGCATCTTTAATCCCTGTCGTTATAATCTTAGCCGTCGGAACACAACTTCAAGCCATTATGACGAAGATGGCACTTCAACTATCAGAAAGACATGCTGTTGTTCAAGGGATCCCTCTTGTTCAAGGTTCGGACAAGTACTTTTGGTTCGGTCGGCCTCGATTGCTTCTTCACCTTATCCACTTTGCTCTGTTTCAGAATGCATTCCAAATAACATATTTCTTTTGGATATGGTACTCCTTTAAGTCACTTAATTCTTGCTTCCATGATAATTTGACGCTTGCACTTGTCAAAGTTGGTTTAGGGGTTGGAGTCCTTTTCGTATGCAGTTATATTACTCTTCCCCTATATGCCCTTGTAACTCAGATGGGTTCAAGCATGAAAAAATCAATCTTTGATGAACAAACATCAAAGGCACTAAAGAAGTGGCACATGGCCGTGAAAAAGAAGCACGGAGGGACCCCCCGGGGGGGGAGGTCTCCAACTAGAACCCTTGGAAGTCCGATTGCTTCCACCGGACACACTCTCCACCGTTACAAAACCGTCGGCCACTCGGGCCGAACGGCTTCCATGTTTGAGGACCCAGTTGAGGCGTCTGATCTAGAGGTTGCAGAGCCACTGTCACCTACATCAGCCTCCACCAACCATGCCATAAGATTGGATCTAGATGGTGATCATCCTCATCATCACGAGCAACTTATTGAACTCAGCGATGAATCACACCGTAAAGATTCGAAGAAAAACCAGGATGATTTCTCATTTGTGAAACCTTGA 1734 44.93 MKMVGMALLRLCLWSLLAGAAMGAPAPAKDSTTRDLDRTPTWAVAGVCAVMILLSIGLEKVLHKIGHWLTERHKNAMYEALEKVKDELMILGFISLLLTFSQYYIAEICIPIEVADTMLPCKAEKGYVKEENKRQLLSYDRRVLAGGYPSACKDGKVPLITVNGLHQLHILIFFLAVFHVVYSAITMALGRLKIRGWKDWEKETSSHDYEFSNDPTRFRLTHETSFVRAHTSFWTRIPFFFYFGCFLRQFFRSVGKTDYMTLRNGFITDHLAPGTKFNFQKYIKRSLEDDFKLIVGVSPVLWASFVIFLLLNVAGWQALFWASLIPVVIILAVGTQLQAIMTKMALQLSERHAVVQGIPLVQGSDKYFWFGRPRLLLHLIHFALFQNAFQITYFFWIWYSFKSLNSCFHDNLTLALVKVGLGVGVLFVCSYITLPLYALVTQMGSSMKKSIFDEQTSKALKKWHMAVKKKHGGTPRGGRSPTRTLGSPIASTGHTLHRYKTVGHSGRTASMFEDPVEASDLEVAEPLSPTSASTNHAIRLDLDGDHPHHHEQLIELSDESHRKDSKKNQDDFSFVKP 577
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
12 7840982 7845232 + Conep12aG0090600.1 Cone12ag0880 449724
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cone12ag0880 577 PANTHER MLO-LIKE PROTEIN 1 29 515 IPR004326 GO:0006952(InterPro)|GO:0016020(InterPro)
Cone12ag0880 577 MobiDBLite consensus disorder prediction 553 577 - -
Cone12ag0880 577 MobiDBLite consensus disorder prediction 469 490 - -
Cone12ag0880 577 Pfam Mlo family 34 478 IPR004326 GO:0006952(InterPro)|GO:0016020(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cone12ag0880 Cone-Chr12:7840982 Cone18ag0292 Cone-Chr18:1425343 3.65E-153 dispersed
Cone12ag0880 Cone-Chr12:7840982 Cone17ag1466 Cone-Chr17:9928988 3.55E-161 wgd
Cone12ag0880 Cone-Chr12:7840982 Cone4ag2032 Cone-Chr4:14113354 8.62E-208 wgd
Cone12ag0880 Cone-Chr12:7840982 Cone8ag0911 Cone-Chr8:8829345 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cone12ag0880 K08472 - cit:102613602 770.0