Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cone12ag0915 | ATGGAAAATATTACGGCCCAGTTGAAGGGAGGAATATCGGGGAAGTCATCGACGGGATCACTCATGCGAACTCTGTGCCGGAAGTTCAGGAGGCAGTCTTCGTTGGATACTAGACGGAACAACCTCAGGTTCAGTTTCGGTAGGCAGTCATCCTTTGATCCGATTAGACGTAGTCCTACTCCCGATAACGACCTCTGTGTGCCGGAGAACTTGGACTCGACCATACAGTTGTTGTTCGTGGCGTGCCGAGGGGACGTTAGGGGAGTGGAAGACCTGCTCGATGAGGGGATCGATGTTAATGGCATAGACTTGGACGGCCGCACCGCGCTTCATATTGCTGCTTGTGAGGGTCACGTTGAGGTCGTCAAGCTCTTGCTCAGCCGTAAAGCTAACATCGATGCTCGTGATCGATGGGGCAGTACGGCAGCTGCTGATGCCAAGAACTATGGAAATATGGAAGTTTATAATATTCTGAAGGCACGAGGAGCGAAAATTCTGAAAACCAGGAAAACACCAATGGCTGTTGCTAATCCCCGGGAAGTTCCGGAGTATGAGCTGAATCCAGTTGAGCTTCATATTCGGAAGACTGATGGGATCTCCAAGGGAACATATCAAGTTGCTAAATGGAATGGTACAAAGGTTGCTGTAAAAATACTTGATAAAGACAGCTACTCAGATCCTGAATCTATAAGTGCATTCAAACATGAGCTTACATTGTTGGAAAAGGTCCGGCATCCAAATGTGGTTCAGTTTGTTGGAGCCGTTACCCAAAATGTACCCATGATGATTGTTTCAGAGTATCATCCAAAGGGTGACCTAACTGCCTATCTTCAAAAGAAAGGACGTCTCTCTCCATCTAAAGCTCTAAGATTTGCACTTGATATTGCCAGGGGAATGAACTACCTTCATGAATGTAAGCCAGACCCGGTTATCCACTGTGATTTAAAGCCAAAAAATATTTTGCTGGATAGTGGAGATCAATTGAAGGTAGCTGGATTCGGATTGATAAGATTGTCAAAAGTTTCACCTGACAAAGCAAAACTGGTCCTGCCAGCGGTAAATATCGACCGCTCAAACTTGTACATGGCACCAGAGGTTTACAAGGACAAAATATTTGACAGAAGCGTAGATGCGTTCTCTTTCGGTCTCATGTTATATGAGATGGTTGAAGGCATACAACCTTTCCATCCCAAACCTCCAGAAGAGGTTGCCAGACTCATATGTTTAGAAGGTCAAAGACCTTCATTCAAGATCAAATTAAAAGGTTATCCACCTGATCTAAGAGAGTTGATTGAGGAATGTTGGGATCCAGAACCTGTCGTTAGACCAACTTTCTCTGAGATCCTCGTGCGATTAGACAGAATTGCTGCCAACTACACAAAACAAGGATGGTGGAAAGATACATTTAAGCTTCCATGGGCGATTTTAAGAAGGAAGAGTCTTGTTTCTGACTATGTGAATTCGTCCACTCGGGTGATTCAAAGTTTCCAGTACCTTGGACTTGATGCTAATAATTCTGGAATAAGGGAATATAGAGGAATAATAGGCAGTGGAATTTCAACTTTAGGTCTTGGAAATGTAAGGTCAGGAATCATTTCCCCAATTGGAATTCAATGGACGACACTATACATGCGGCTTGCTTCTACTGCTGCTGCAAAACAACCTGAATTTGATAGTGATGAGGAGAATAACGAGGAGTTAGTTGCTAAGAAGAGAAAGGAAGCATCTCCAGAAGAATGTGATCAAGCGGTAGAAGGTTTGAGTACTGCAAAAGCAAAGGCCAAGGCTAAACGATTGCAGGAATCTCAAAATGCTGATAAAATGATTCTGCAAAGAGTTTGGGCCACTTTCTTAGGAATTGGCCCCTCTTTAAGAGTTGTGGCTTCTATGAGCAGGAAGGACTGGGCGAAGAAGCTTGTTCATTGGAAGGAAGAATTTGTATCAACAATGAAGCATTATTGGCTGGGTTCTAAGCTCTTATGGGCTGATGTAAGGATCAGTTCAAGATTGCTCTTAAAACTTGCTGATGGGAAGAGTCTCTCTAGAAGGGAGAGACAACAACTAACCCGAACTACAGCTGATATTTTTAGGCTGGTTCCTTTTGCTGTGTTTATCATAGTTCCATTCATGGAGTTTCTTCTGCCAGTGTTTCTTAAACTGTTTCCTAATATGTTGCCATCAACTTTTCAAGACAAGATGAAAGAACAGGAGGCCTTGAAAAGGAAACTTAATGCAAGAATAGAGTATGCAAAGTTCCTTCAAGAAACTGCCAAAGAAATGGCAAAGGAAGTTCAAAATTCCCGAAGTGGGGAGCTTAAGAAGACGGCTGAAGATCTTGATCGGTTTTTGAGCAGGGTTAGAACTGGTGCTGGTGTTTCTAATGATGAAATTTTGGGATTTGCGACGCTCTTTAATGATGAACTTACCCTTGATAATATCAGCAGGCCTCGACTTGTGAATATGTGCAAGTACATGGGAATTAGCCCTTTTGGAACGGATGCATACTTACGTTATATGCTCCGAAGAAGATTGCAGCGGATTAAGGAAGATGACAAAATGATTCAAGCAGAGGGTGTGGATTCACTCTCAGAAGCTGAACTTCGTGAAGATTGTAGGGAAAGAGGAATGCTTGGATTGCTTTCTGTGGAAGAAATGCGCCAGCAGCTTCGTGATTGGTTGGATCTTTCACTTAATCACTCAGTTCCATCTTCACTTATGATTCTTTCCAGGGCCTTCACTTTATCCGGAAGGTTGAAGCCAGAGGAGGCTGTCCAAGCTACGCTGTCTTCACTACCAGATGAAGTTGTTGGAACGGTTGGTGTTACAGCTTTGCCATCTGAAGATTCTGTATCAGAAAGGAGGAGGAAGTTGGAATTCCTTAAAATGCAGGAGGAATTGATTAAGGAGGAGGAGGAGAAAGAAGAAGAGGAACATGCCAGAATGAGTGAAACTAGATCCAGTCAAGAAGATTTGGCATTAAGGGAAATGCGCAATCCGACTGCAAGAGAAGCACAAGAACAAGCTAGACTGAGAACAGTGGAAAAACAAGAGCAGCTATGTGAACTCAGCCATGCATTGGCAGTTCTGGCATCTGCATCCTCTGTGAGCAGAGAGCGTGAAGAGTTCTTGAGACTTGTTAATAAGGAGATAGAACTTTATAATAGCATGGTAGAAAAAGAGGGTACAGAAGGTGAAGAAGAGGCAATGAAAGCATATAAAGCTGCTCGGGAGGAAACTGTGCTCTCTAATGATGCAGATGAAGATGATGAGATCTCATCAGCACTCGTAGAAAGAGTTGATGCTATGCTTCAAAACCTTGAAAAGGAAATTGATGATGTAGATGCCAAAATTGGTGATTGTTTGCAATTACTGGACAGGGATTTTGATGGAAAAGTATCTCCTGAGGAGGTTGCAGCTGCTGCTATGTACCTGAAGGATACATTAGGCAAGGAAGGTGTCCAAGAACTTATCAGCAATCTTTCCAAAGATACTGATGGAAAAATTCTTGTAGAAGACATTGTTAGATTGGGCAGTCGAGTTAAATACTCACGGCCTCCGGAAGATGGAAAAATGTAA | 3576 | 43.09 | MENITAQLKGGISGKSSTGSLMRTLCRKFRRQSSLDTRRNNLRFSFGRQSSFDPIRRSPTPDNDLCVPENLDSTIQLLFVACRGDVRGVEDLLDEGIDVNGIDLDGRTALHIAACEGHVEVVKLLLSRKANIDARDRWGSTAAADAKNYGNMEVYNILKARGAKILKTRKTPMAVANPREVPEYELNPVELHIRKTDGISKGTYQVAKWNGTKVAVKILDKDSYSDPESISAFKHELTLLEKVRHPNVVQFVGAVTQNVPMMIVSEYHPKGDLTAYLQKKGRLSPSKALRFALDIARGMNYLHECKPDPVIHCDLKPKNILLDSGDQLKVAGFGLIRLSKVSPDKAKLVLPAVNIDRSNLYMAPEVYKDKIFDRSVDAFSFGLMLYEMVEGIQPFHPKPPEEVARLICLEGQRPSFKIKLKGYPPDLRELIEECWDPEPVVRPTFSEILVRLDRIAANYTKQGWWKDTFKLPWAILRRKSLVSDYVNSSTRVIQSFQYLGLDANNSGIREYRGIIGSGISTLGLGNVRSGIISPIGIQWTTLYMRLASTAAAKQPEFDSDEENNEELVAKKRKEASPEECDQAVEGLSTAKAKAKAKRLQESQNADKMILQRVWATFLGIGPSLRVVASMSRKDWAKKLVHWKEEFVSTMKHYWLGSKLLWADVRISSRLLLKLADGKSLSRRERQQLTRTTADIFRLVPFAVFIIVPFMEFLLPVFLKLFPNMLPSTFQDKMKEQEALKRKLNARIEYAKFLQETAKEMAKEVQNSRSGELKKTAEDLDRFLSRVRTGAGVSNDEILGFATLFNDELTLDNISRPRLVNMCKYMGISPFGTDAYLRYMLRRRLQRIKEDDKMIQAEGVDSLSEAELREDCRERGMLGLLSVEEMRQQLRDWLDLSLNHSVPSSLMILSRAFTLSGRLKPEEAVQATLSSLPDEVVGTVGVTALPSEDSVSERRRKLEFLKMQEELIKEEEEKEEEEHARMSETRSSQEDLALREMRNPTAREAQEQARLRTVEKQEQLCELSHALAVLASASSVSREREEFLRLVNKEIELYNSMVEKEGTEGEEEAMKAYKAAREETVLSNDADEDDEISSALVERVDAMLQNLEKEIDDVDAKIGDCLQLLDRDFDGKVSPEEVAAAAMYLKDTLGKEGVQELISNLSKDTDGKILVEDIVRLGSRVKYSRPPEDGKM | 1191 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
12 | 8050576 | 8060498 | + | Conep12aG0094100.1 | Cone12ag0915 | 449759 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cone12ag0915 | 1191 | Gene3D | - | 1036 | 1190 | - | - | |
Cone12ag0915 | 1191 | SMART | ANK_2a | 72 | 101 | IPR002110 | GO:0005515(InterPro) | |
Cone12ag0915 | 1191 | SMART | ANK_2a | 105 | 134 | IPR002110 | GO:0005515(InterPro) | |
Cone12ag0915 | 1191 | SMART | ANK_2a | 138 | 167 | IPR002110 | GO:0005515(InterPro) | |
Cone12ag0915 | 1191 | SUPERFAMILY | EF-hand | 1111 | 1176 | IPR011992 | - | |
Cone12ag0915 | 1191 | CDD | STKc_MAP3K-like | 199 | 452 | - | - | |
Cone12ag0915 | 1191 | SMART | serkin_6 | 193 | 456 | IPR000719 | GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro) | |
Cone12ag0915 | 1191 | Gene3D | Transferase(Phosphotransferase) domain 1 | 269 | 472 | - | - | |
Cone12ag0915 | 1191 | MobiDBLite | consensus disorder prediction | 968 | 992 | - | - | |
Cone12ag0915 | 1191 | Pfam | Ankyrin repeats (3 copies) | 78 | 166 | IPR002110 | GO:0005515(InterPro) | |
Cone12ag0915 | 1191 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 310 | 322 | IPR008271 | GO:0004672(InterPro)|GO:0006468(InterPro) | |
Cone12ag0915 | 1191 | FunFam | serine/threonine-protein kinase STY46-like | 186 | 269 | - | - | |
Cone12ag0915 | 1191 | ProSiteProfiles | Ankyrin repeat region circular profile. | 105 | 137 | - | - | |
Cone12ag0915 | 1191 | ProSiteProfiles | Ankyrin repeat profile. | 105 | 137 | IPR002110 | GO:0005515(InterPro) | |
Cone12ag0915 | 1191 | ProSiteProfiles | Protein kinase domain profile. | 189 | 455 | IPR000719 | GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro) | |
Cone12ag0915 | 1191 | Pfam | Protein tyrosine and serine/threonine kinase | 199 | 451 | IPR001245 | GO:0004672(InterPro)|GO:0006468(InterPro) | |
Cone12ag0915 | 1191 | SUPERFAMILY | Protein kinase-like (PK-like) | 202 | 452 | IPR011009 | - | |
Cone12ag0915 | 1191 | ProSiteProfiles | EF-hand calcium-binding domain profile. | 1112 | 1147 | IPR002048 | GO:0005509(InterPro) | |
Cone12ag0915 | 1191 | Gene3D | - | 58 | 184 | IPR036770 | - | |
Cone12ag0915 | 1191 | ProSiteProfiles | Letm1 ribosome-binding (RBD) domain profile. | 741 | 933 | IPR033122 | GO:0043022(InterPro) | |
Cone12ag0915 | 1191 | FunFam | Integrin-linked protein kinase 1 | 47 | 184 | - | - | |
Cone12ag0915 | 1191 | Coils | Coil | 1096 | 1123 | - | - | |
Cone12ag0915 | 1191 | Pfam | LETM1-like, RBD | 680 | 913 | IPR033122 | GO:0043022(InterPro) | |
Cone12ag0915 | 1191 | PANTHER | LEUCINE ZIPPER-EF-HAND CONTAINING TRANSMEMBRANE PROTEIN | 556 | 1085 | IPR044202 | GO:0005743(InterPro)|GO:0006875(PANTHER) | |
Cone12ag0915 | 1191 | SUPERFAMILY | Ankyrin repeat | 77 | 172 | IPR036770 | - | |
Cone12ag0915 | 1191 | Gene3D | Phosphorylase Kinase; domain 1 | 189 | 268 | - | - | |
Cone12ag0915 | 1191 | FunFam | Integrin-linked protein kinase family | 269 | 468 | - | - | |
Cone12ag0915 | 1191 | Coils | Coil | 957 | 980 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cone10ag0610 | Cone-Chr10:2895140 | Cone12ag0915 | Cone-Chr12:8050576 | 2.61E-306 | dispersed | |
Cone12ag0915 | Cone-Chr12:8050576 | Cone3ag0636 | Cone-Chr3:3159585 | 6.60e-316 | dispersed | |
Cone12ag0915 | Cone-Chr12:8050576 | Cone8ag0943 | Cone-Chr8:9024987 | 2.31E-244 | wgd |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
81970 | PF13812 | PPR_3 | 0.00056 | CL0020 | Cone | PK |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cone12ag0915 | K17800 | - | cit:102618806 | 1017.68 |