Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cone12ag0942 ATGGACGCCAAGCAAAAGCGACTCCGTCTACGGCCAAAACTCGATCGCCGAAACGCCGTCGGAAACATAGACTACGAAGTCTCTACTTCTTCTTCTTCAACTTCAGATCTTCGAACTCGTGCGCTCGACCTTTACCACATTAGCTTCAGAATTGGGAAGGACAAAAAGCACGCTCTCCATCCGCTCTTGCTTCTCGCTCCAAATCGCCAACACATTGAGGTTCAGCTAAGTCGAAGCTCGATGAAGTCGTTTCTCAGGAAAGAGCTTACTCCTGCGAAAAATAGTGAAAGTGATAATCATGGTCATGTTTCTGTCATTGTTGTTGAGCGGGTACCTAGTACTTCTCCTAATGGGAGATTCAAACGCATAATTTCCGGACCATGGCAGAAGGGTAAACTGCTGGCCTGGGAAGTGGGTCCTTTGGAGCCGTGTATGAGGCCTTCACTGCAGATTTCTCTTTTGAGTCAGCTTGAACACGAGAATATAGTTCAGTATCTTGGCACAGAGAAGGATGAAACTAAGCTTTACATCTTCCTTGAGCTTGTGACCAAAGGATCACTAGCAAGCCTCTATCGTAGCTATCACTTGAAGGATTCTCAAGTCTCTTTCTACACCTGGCAGATTCTGCACGGTTTAAATTATCTTCATGACCAAAATGTGGTTCACAGTGTGAGAAGATGCCAGACTCACTCCTTTAATGTAGCCAAATTAAATGACATGAAATTGGGCAAAGGTTCCCCATATTGGATGGTTCCTGAGGTTGTTAATCCAGAGAACCATGGTTACGGACTTGCAGCTGACATATGGAGCCTTGGGTGTACTGTGTTGGAGATGTTAACCGTCAGCCTCCTTAATCTGATTTGGAAGGCCTGTTTAATTGGTGATATTATTTATGTCTCCTTACAGATGCAGGCATTACTTATGATTGGCAGGAATAAACTTCCTTACCTTCCTAATTCCTTATCCAGAGAAGCCCGGGATTTCATTCTCAGTTGCTTGCAAGTTAATCCTAGTGATAGGCCTACAGCAGGTCAGTTATTAGATCATCAGTTTCTTAGGACTGTTCCTGCTTCTCCTTGTTGCAGTGGGATGTCTTGA 1098 44.54 MDAKQKRLRLRPKLDRRNAVGNIDYEVSTSSSSTSDLRTRALDLYHISFRIGKDKKHALHPLLLLAPNRQHIEVQLSRSSMKSFLRKELTPAKNSESDNHGHVSVIVVERVPSTSPNGRFKRIISGPWQKGKLLAWEVGPLEPCMRPSLQISLLSQLEHENIVQYLGTEKDETKLYIFLELVTKGSLASLYRSYHLKDSQVSFYTWQILHGLNYLHDQNVVHSVRRCQTHSFNVAKLNDMKLGKGSPYWMVPEVVNPENHGYGLAADIWSLGCTVLEMLTVSLLNLIWKACLIGDIIYVSLQMQALLMIGRNKLPYLPNSLSREARDFILSCLQVNPSDRPTAGQLLDHQFLRTVPASPCCSGMS 365
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
12 8202842 8206216 + Conep12aG0097000.1 Cone12ag0942 449786
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cone12ag0942 365 Gene3D Transferase(Phosphotransferase) domain 1 131 223 - -
Cone12ag0942 365 Gene3D Transferase(Phosphotransferase) domain 1 227 360 - -
Cone12ag0942 365 PANTHER MAP KINASE KINASE KINASE SSK2-RELATED-RELATED 240 354 IPR050538 -
Cone12ag0942 365 Pfam Protein tyrosine and serine/threonine kinase 151 347 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
Cone12ag0942 365 ProSiteProfiles Protein kinase domain profile. 109 352 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cone12ag0942 365 SUPERFAMILY Protein kinase-like (PK-like) 150 356 IPR011009 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cone12ag0942 Cone-Chr12:8202842 Cone7ag1559 Cone-Chr7:10715928 7.44E-74 dispersed
Cone12ag0942 Cone-Chr12:8202842 Cone8ag0976 Cone-Chr8:9169745 4.05E-124 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
81971 PF00248 Aldo_ket_red 5.40E-19 No_clan Cone PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cone12ag0942 K13414 - mdm:103428929 255.373